Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1016 |
Symbol | wzxC |
ID | 6146636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1035406 |
End bp | 1036884 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641615903 |
Product | colanic acid exporter |
Protein accession | YP_001743095 |
Protein GI | 170681740 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.6233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTAC GTGAAAAAAC CATCAGCGGC GCGAAGTGGT CGGCGATTGC CACGGTAATC ATTATCGGCC TCGGGCTGGT GCAGATGACC GTGCTGGCGC GGATTATCGA CAACCACCAG TTCGGCCTGC TTACCGTGTC GCTGGTGATT ATCGCGCTGG CAGATACGCT TTCTGACTTC GGTATCGCTA ACTCGATTAT TCAGCGAAAA GAAATCAGTC ACCTGGAACT TACCACGTTG TACTGGCTGA ACGTCGGGCT GGGGCTTGTG GTGTGTGTGG CGGTGTTTTT GTTGAGTGAT CTCATTGGTG ACGTGCTGAA CAACCCGGAC CTGGCACCGT TGATTAAAAC ATTGTCGCTG GCGTTTGTGG TGATCCCCCA CGGGCAGCAG TTCCGCGCGT TGATGCAAAA AGAGCTGGAG TTCAACAAAA TCGGCATGAT CGAAACCAGC GCGGTGCTGG CGGGCTTTAC TTTTACGGTG GTTAGCGCCC ATTTCTGGCC ACTGGCGATG ACCGCGATCC TCGGTTATCT GGTCAATAGT GCGGTAAGAA CGCTGCTGTT TGGCTACTTT GGTCGCAAAA TTTATCGCCC CGGTCTGCAT TTCTCGCTGG CGTCGGTGGC ACCGAACTTA CGCTTTGGTG CCTGGCTGAC GGCGGACAGC ATCATCAACT ATCTCAATAC CAACCTTTCA ACGCTGGTGC TGGCGCGTAT TCTCGGCGCG GGCGTGGCAG GGGGATACAA CCTGGCGTAC AACGTGGCCG TTGTGCCGCC GATGAAGCTG AACCCAATCA TCACCCGCGT GTTGTTTCCG GCATTTGCCA AAATTCAGGA CGACACCGAA AAGCTGCGCG TTAACTTCTA CAAGCTGCTG TCGGTAGTGG GGATTATCAA CTTTCCGGCG CTGCTGGGGC TGATGGTGGT GTCGAATAAC TTTGTACCGC TGGTCTTTGG TGAGAAGTGG AACAGCATTA TTCCGGTGCT GCAATTGCTG TGTGTGGTGG GGCTGCTGCG CTCAGTGGGG AACCCGATTG GTTCGCTGCT GATGGCGAAA GCGCGGGTCG ATATCAGCTT TAAATTCAAC GTATTCAAAA CCTTTCTGTT TATTCCGGCG ATTGTTATTG GTGGGCAGAT GGCGGGCGCA ATCGGCGTCA CGCTTGGCTT CCTGCTGGTG CAGATTATCA ACACCATTCT GAGCTATTTC GTGATGATTA AACCGGTGCT CGGTTCCAGT TATCGCCAGT ACATCCTGAG TTTGTGGCTG CCGTTTTACC TCTCGCTGCC GACGCTGGGG GTCAGTTATG CGCTGGGCAT TGTGCTGAAA GGGCAACTGG CGCTGGGGAT GCTGCTGGCG GTGCAAATAG CCGCGGGCGT GCTGGCGTTT GTGGTGATGA TTGTGCTGTC GCGCCATTCG TTGGTGGTGG AAGTGAAGCG TCAGTTTTGT CGCAGCGAAA AAATGAAAAT GCTTTTACGG GCGGGGTGA
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Protein sequence | MSLREKTISG AKWSAIATVI IIGLGLVQMT VLARIIDNHQ FGLLTVSLVI IALADTLSDF GIANSIIQRK EISHLELTTL YWLNVGLGLV VCVAVFLLSD LIGDVLNNPD LAPLIKTLSL AFVVIPHGQQ FRALMQKELE FNKIGMIETS AVLAGFTFTV VSAHFWPLAM TAILGYLVNS AVRTLLFGYF GRKIYRPGLH FSLASVAPNL RFGAWLTADS IINYLNTNLS TLVLARILGA GVAGGYNLAY NVAVVPPMKL NPIITRVLFP AFAKIQDDTE KLRVNFYKLL SVVGIINFPA LLGLMVVSNN FVPLVFGEKW NSIIPVLQLL CVVGLLRSVG NPIGSLLMAK ARVDISFKFN VFKTFLFIPA IVIGGQMAGA IGVTLGFLLV QIINTILSYF VMIKPVLGSS YRQYILSLWL PFYLSLPTLG VSYALGIVLK GQLALGMLLA VQIAAGVLAF VVMIVLSRHS LVVEVKRQFC RSEKMKMLLR AG
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