| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1000 |
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| Symbol | |
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| ID | 6146395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1018324 |
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| End bp | 1019463 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615887 |
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| Product | polysaccharide biosynthesis/export protein |
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| Protein accession | YP_001743079 |
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| Protein GI | 170683770 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAT CCAAAATGAA ATTGATGCCA TTATTGGTGT CAGTAACCTT GATAAGCGGT
TGCACAGTAC TTCCGGGCAG CAATATGTCG ACGATGGGGA AAGACGTCAT CAAACAGCAG
GACGCTGATT TCGATCTCGA CAAAATGGTG AATGTTTATC CGTTGACCCC GCGCCTGATT
GATCAATTAC GCCCACGCCC GAATGTAGCG CGCCCCAATA TGACGCTGGA AAGTGAGATC
GCGAATTATC AGTATCGCGT CGGGCCGGGA GACGTTCTTA ATGTCACCGT CTGGGATCAC
CCGGAACTCA CCACGCCAGC CGGTCAGTAC CGCAGCTCCA GCGACACCGG CAACTGGGTA
CAGCCTGACG GCACCATGTT CTACCCGTAT ATCGGCAAAG TTCACGTGGT GGGGAAAACG
CTCGCTGAAA TCCGCAGTGA TATTACCGGG CGCTTAGCGA CGTACATCGC TGACCCGCAG
GTGGACGTTA ATATCGCCGC CTTCCGCTCG CAAAAAGCCT ATATCTCCGG TCAGGTGAAT
AAATCCGGTC AACAGGCGAT CACCAACGTG CCACTGACCA TTCTCGACGC CATCAACGCC
GCAGGTGGCC TGACCGACAC CGCTGACTGG CGCAACGTGG TGCTAACACA CAATGGTCGT
GAAGAGCGCA TTTCTTTGCA GGCGCTGATG CAAAACGGCG ACCTCAATCA GAACCGACTG
CTTTACCCCG GCGATATTCT CTACGTGCCG CGTAATGATG ATCTGAAAGT GTTTGTGATG
GGTGAAGTGA AGAAACAGAG CACCCTGAAA ATGGACTTTA GCGGCATGAC CCTGACTGAA
GCCCTGGGCA ATGCTGAAGG TATCGACATG ACCACCTCCA ACGCCAGCGG CATCTTTGTC
ATTCGTCCGT TGAAAGGCGA GGGCGGGCGT AACGGCAAGA TTGCCAATAT CTACCAGCTG
GATATGTCCG ATGCCACGTC GCTGGTGATG GCGACAGAAT TCCGCCTGCA ACCTTATGAC
GTGGTGTATG TCACCACCGC CCCGGTATCC CGCTGGAACC GTCTGATCAA TCAGTTGCTG
CCAACTATTA GCGGTGTCCG TTACATGACG GATACAGCCA GCGACATTCA TAACTGGTAA
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| Protein sequence | MMKSKMKLMP LLVSVTLISG CTVLPGSNMS TMGKDVIKQQ DADFDLDKMV NVYPLTPRLI
DQLRPRPNVA RPNMTLESEI ANYQYRVGPG DVLNVTVWDH PELTTPAGQY RSSSDTGNWV
QPDGTMFYPY IGKVHVVGKT LAEIRSDITG RLATYIADPQ VDVNIAAFRS QKAYISGQVN
KSGQQAITNV PLTILDAINA AGGLTDTADW RNVVLTHNGR EERISLQALM QNGDLNQNRL
LYPGDILYVP RNDDLKVFVM GEVKKQSTLK MDFSGMTLTE ALGNAEGIDM TTSNASGIFV
IRPLKGEGGR NGKIANIYQL DMSDATSLVM ATEFRLQPYD VVYVTTAPVS RWNRLINQLL
PTISGVRYMT DTASDIHNW
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