Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0968 |
Symbol | gatY |
ID | 6144270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 978880 |
End bp | 979734 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615855 |
Product | tagatose-bisphosphate aldolase |
Protein accession | YP_001743047 |
Protein GI | 170681634 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases [TIGR01858] class II aldolase, tagatose bisphosphate family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.504675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACGTGG TATCGACAAA GCAGATGCTG AACAACGCGC AGCGCGGCGG TTATGCGGTT CCGGCATTCA ATATTCACAA TCTCGAAACG ATGCAAGTGG TGGTGGAAAC TGCTGCCAGC ATGCATGCGC CGGTCATCAT CGCCGGAACG CCCGGCACAT TTACTCATGC CGGTACAGAA AATCTGATGG CGCTGGTCAG CGCGATGGCG AAGCAATATC ACCATCCACT GGCGATTCAT CTCGACCATC ACACGAAATT TGACGATATC GCTCAGAAGG TTCGTTCTGG CGTGCGCTCA GTCATGATTG ACGCCTCGCA TTTGCCTTTT GCGCAAAATA TTTCACGGGT CAAAGAGGTG GTGGATTTTT GCCATCGCTT TGATGTCAGC GTCGAAGCGG AGCTGGGGCA ACTTGGCGGC CAGGAAGATG ATGTGCAAGT CAATGAAGCC GATGCGTTGT ACACCAACCC CGTTCAGGCG CGTGAATTTG CCGAGGCAAC CGGGATTGAT TCCCTGGCGG TCGCCATCGG CACGGCTCAC GGTATGTATG CCAGCGCACC GGCGCTTGAT TTTTCTCGAC TGGAGAACAT TCGCCAGTGG GTGAACTTAC CGCTGGTGCT GCATGGTGCG TCAGGATTAT CGACTAAGGA TATTCAGCAA ACCATCAAAC TGGGGATATG CAAAATCAAC GTTGCAACGG AGCTGAAAAA TGCCTTCTCG CAGGCGTTAA AAAATTACCT GACCGAGCAC CCCGAAGCGA CCGATCCCCG GGATTATTTG CAGTCGGCTA AATTCGCAAT GCGCGATGTG GTGAGCAAAG TGATTGCCGA TTGTGGCTGC GAGGGCAGGG CATAA
|
Protein sequence | MYVVSTKQML NNAQRGGYAV PAFNIHNLET MQVVVETAAS MHAPVIIAGT PGTFTHAGTE NLMALVSAMA KQYHHPLAIH LDHHTKFDDI AQKVRSGVRS VMIDASHLPF AQNISRVKEV VDFCHRFDVS VEAELGQLGG QEDDVQVNEA DALYTNPVQA REFAEATGID SLAVAIGTAH GMYASAPALD FSRLENIRQW VNLPLVLHGA SGLSTKDIQQ TIKLGICKIN VATELKNAFS QALKNYLTEH PEATDPRDYL QSAKFAMRDV VSKVIADCGC EGRA
|
| |