Gene EcSMS35_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0968 
SymbolgatY 
ID6144270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp978880 
End bp979734 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content53% 
IMG OID641615855 
Producttagatose-bisphosphate aldolase 
Protein accessionYP_001743047 
Protein GI170681634 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01858] class II aldolase, tagatose bisphosphate family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.504675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTGG TATCGACAAA GCAGATGCTG AACAACGCGC AGCGCGGCGG TTATGCGGTT 
CCGGCATTCA ATATTCACAA TCTCGAAACG ATGCAAGTGG TGGTGGAAAC TGCTGCCAGC
ATGCATGCGC CGGTCATCAT CGCCGGAACG CCCGGCACAT TTACTCATGC CGGTACAGAA
AATCTGATGG CGCTGGTCAG CGCGATGGCG AAGCAATATC ACCATCCACT GGCGATTCAT
CTCGACCATC ACACGAAATT TGACGATATC GCTCAGAAGG TTCGTTCTGG CGTGCGCTCA
GTCATGATTG ACGCCTCGCA TTTGCCTTTT GCGCAAAATA TTTCACGGGT CAAAGAGGTG
GTGGATTTTT GCCATCGCTT TGATGTCAGC GTCGAAGCGG AGCTGGGGCA ACTTGGCGGC
CAGGAAGATG ATGTGCAAGT CAATGAAGCC GATGCGTTGT ACACCAACCC CGTTCAGGCG
CGTGAATTTG CCGAGGCAAC CGGGATTGAT TCCCTGGCGG TCGCCATCGG CACGGCTCAC
GGTATGTATG CCAGCGCACC GGCGCTTGAT TTTTCTCGAC TGGAGAACAT TCGCCAGTGG
GTGAACTTAC CGCTGGTGCT GCATGGTGCG TCAGGATTAT CGACTAAGGA TATTCAGCAA
ACCATCAAAC TGGGGATATG CAAAATCAAC GTTGCAACGG AGCTGAAAAA TGCCTTCTCG
CAGGCGTTAA AAAATTACCT GACCGAGCAC CCCGAAGCGA CCGATCCCCG GGATTATTTG
CAGTCGGCTA AATTCGCAAT GCGCGATGTG GTGAGCAAAG TGATTGCCGA TTGTGGCTGC
GAGGGCAGGG CATAA
 
Protein sequence
MYVVSTKQML NNAQRGGYAV PAFNIHNLET MQVVVETAAS MHAPVIIAGT PGTFTHAGTE 
NLMALVSAMA KQYHHPLAIH LDHHTKFDDI AQKVRSGVRS VMIDASHLPF AQNISRVKEV
VDFCHRFDVS VEAELGQLGG QEDDVQVNEA DALYTNPVQA REFAEATGID SLAVAIGTAH
GMYASAPALD FSRLENIRQW VNLPLVLHGA SGLSTKDIQQ TIKLGICKIN VATELKNAFS
QALKNYLTEH PEATDPRDYL QSAKFAMRDV VSKVIADCGC EGRA