| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0905 |
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| Symbol | |
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| ID | 6145937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 911930 |
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| End bp | 913366 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641615793 |
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| Product | multidrug resistance outer membrane protein MdtQ |
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| Protein accession | YP_001742985 |
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| Protein GI | 170681074 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.601202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.184806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTG ATTCTTTTTA TCCAGCCATC GCCTGTTTTC CGCTGTTACT GATGCTGGCC
GGGTGTGCGC CTATGCATGA AACCCGCCAG GAGTTAAGCC AGCAAACACC CGCGGCACAA
GTTGACACCG CATTACCCAC GGCGCTGAAA AATGGTTGGC CAGACAGCCA ATGGTGGCTG
GAGTATCACG ATAATCAACT CACTTCATTA ATTAACAATG CACTACAGAA CGCACCGGAT
ATGCAGGTGG CTGAACAGCG CATTCAGCTG GCTGAAGCCC AGGCGAAGGC AGTTGCCACT
CAGGATGGTC CGCAGCTCGA CTTTTCTGCG GATATGGAGC GGCAAAAAAT GTCGGCAGAA
GGGTTAATGG GGCCGTTTGC TTTGAACGAT CCGGCCGCAG GTACGACCGG TCCGTGGTAC
ACCAACGGTA CTTTTGGCTT AACGGCGGGC TGGCATCTCG ATATCTGGGG AAAGAATCGG
GCGGAGGTAA CTGCTCGCCT GGGTACGGTT AAAGCACGGG TGGCGGAACG CGAGCAAACC
CGCCAATTGC TGGCTGGCAG CGTAGCCCGC CTGTACTGGG AGTGGCAAAC CCAGGCGGCG
TTAAACACGG TCTTGCAGCA AATCGAAAAA GAGCAGAACA CCCTTATCGT GACCGATCGC
CAGCTATATC AGAACGGGAT TACTTCTTCA GTTGAAGGTG TGGAAACCGA TATTAATGCC
AGCAAAACCC GGCAGCAGCT CAACGATGTC GCGGGGAAAA TGAAAATTAT TGAGGCACGG
TTAAGTGCGC TCACCAACCA CCAGACAAAG TCATTGAAGC TTAAACCGGT CGCGTTGCCG
AAAGTGGCAA GTCAGCTTCC TGATGAACTC GGGTACTCCT TACTGGCCCG GCGGGCAGAT
TTGCAGGCGG CGCACTGGTA CGTTGAGTCA TCGTTAAGCA CTATTGATGC GGCAAAAGCG
GCATTTTATC CTGACATCAA CCTGATGGCC TTTCTGCAAC AGGATGCGTT GCACTTAAGC
GATCTGTTCC GTCATTCCGC GCAGCAAATG GGCGTTACGG CAGGCCTGAC GCTACCCATT
TTCGATAGTG GTCGTCTTAA CGCCAATCTC GATATCGCAA AAGCCGAAAG CAACTTGTCT
ATCGCCAGCT ACAACAAAGC GGTGGTTGAA GCGGTGAATG ACGTGGCGCG GGCAGCCAGT
CAGGTTCAGA CACTGGCGGA GAAAAACCAG CATCAGGCGC AAATTGAGCG CGATGCCTTA
CGTGTGGTAG GTCTTGCGCA GGCCCGCTTT AACGCGGGTA TCATTGCCGG TTCCCGCGTC
AGCGAAGCCA GGATCCCGGC GCTGCGTGAG CGGGCCAATG GCCTGTTATT GCAAGGGCAG
TGGCTGGATG CCTCCATTCA ACTCACTGGT GCGTTGGGCG GGGGTTACAA ACGCTGA
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| Protein sequence | MNRDSFYPAI ACFPLLLMLA GCAPMHETRQ ELSQQTPAAQ VDTALPTALK NGWPDSQWWL
EYHDNQLTSL INNALQNAPD MQVAEQRIQL AEAQAKAVAT QDGPQLDFSA DMERQKMSAE
GLMGPFALND PAAGTTGPWY TNGTFGLTAG WHLDIWGKNR AEVTARLGTV KARVAEREQT
RQLLAGSVAR LYWEWQTQAA LNTVLQQIEK EQNTLIVTDR QLYQNGITSS VEGVETDINA
SKTRQQLNDV AGKMKIIEAR LSALTNHQTK SLKLKPVALP KVASQLPDEL GYSLLARRAD
LQAAHWYVES SLSTIDAAKA AFYPDINLMA FLQQDALHLS DLFRHSAQQM GVTAGLTLPI
FDSGRLNANL DIAKAESNLS IASYNKAVVE AVNDVARAAS QVQTLAEKNQ HQAQIERDAL
RVVGLAQARF NAGIIAGSRV SEARIPALRE RANGLLLQGQ WLDASIQLTG ALGGGYKR
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