| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0901 |
|---|
| Symbol | hcr |
|---|
| ID | 6143830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 906081 |
|---|
| End bp | 907049 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641615789 |
|---|
| Product | HCP oxidoreductase, NADH-dependent |
|---|
| Protein accession | YP_001742981 |
|---|
| Protein GI | 170683685 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.843947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGC CAACGAATCA ATGCCCGTGG CGGATGCAGG TTCATCACAT TACGCAAGAA
ACGCCGGATG TGTGGACGAT TTCCCTGATT TGCCACGATT ACTACCCATA TCGCGCCGGG
CAATATGCAC TGGTCAGCGT GCGTAACTCA GCGGAAACGC TGCGTGCTTA CACCATTTCC
TCCACGCCAG GCGTGAGTGA ATACATCACC CTGACTGTGC GGCGGATTGA TGACGGTGTC
GGCTCCCGGT GGCTGACGCG CGATGTAAAA CGCGGTGATT ATCTCTGGCT TTCGGACGCG
ATGGGGGAAT TTACCTGCGA CGATAAAGCA GAAGATAAAT TCCTGTTGCT GGCGGCAGGC
TGCGGCGTTA CGCCGATTAT GTCGATGCGT CGCTGGCTGG CGAAGAACCG TCCACAGGCC
GATGTGCAGG TGATCTACAA CGTGCGTACG CCGCAGGATG TGATTTTCGC CGATGAGTGG
CGTAACTATC CGGTAACGCT GGTGGCGGAA AATAACGTTA CCGAAGGCTT TATCGCTGGT
CGTCTCACTC GCGAACTGCT GGCAGGTGTC CCTGATTTAG CCTCACGTAC CGTGATGACC
TGTGGCCCTG CTCCATATAT GGATTGGGTA GAGCAGGAAG TGAAAGCGCT CGGCGTGACG
CGTTTCTTTA AAGAGAAATT CTTCACCCCA GTAGCGGAAG CGGCGACCAG CGGTCTGAAA
TTCACCAAAC TGCAACCGGC ACGAGAATTT TACGCCCCGG TTGGCACCAC GCTACTGGAG
GCGCTGGAAA GCAATAACGT TCCGGTTGTC GCCGCCTGCC GCGCAGGTGT TTGCGGCTGC
TGTAAGACGA AAGTGGTTTC CGGTGAATAT ACGGTGAGCA GCACAATGAC GCTGACCGAC
GCCGAAATCG CTGAAGGTTA CGTACTGGCC TGCTCCTGCC ATCCGCAGGG GGATTTGGTT
CTCGCATAA
|
|---|
| Protein sequence | MTMPTNQCPW RMQVHHITQE TPDVWTISLI CHDYYPYRAG QYALVSVRNS AETLRAYTIS
STPGVSEYIT LTVRRIDDGV GSRWLTRDVK RGDYLWLSDA MGEFTCDDKA EDKFLLLAAG
CGVTPIMSMR RWLAKNRPQA DVQVIYNVRT PQDVIFADEW RNYPVTLVAE NNVTEGFIAG
RLTRELLAGV PDLASRTVMT CGPAPYMDWV EQEVKALGVT RFFKEKFFTP VAEAATSGLK
FTKLQPAREF YAPVGTTLLE ALESNNVPVV AACRAGVCGC CKTKVVSGEY TVSSTMTLTD
AEIAEGYVLA CSCHPQGDLV LA
|
|---|
| |