| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0879 |
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| Symbol | rimK |
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| ID | 6145951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 884599 |
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| End bp | 885501 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641615767 |
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| Product | ribosomal protein S6 modification protein |
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| Protein accession | YP_001742959 |
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| Protein GI | 170681044 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.734196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAATTG CCATATTGTC CCGGGATGGA ACGCTCTATT CGTGTAAGCG GCTGCGTGAA
GCCGCTATAC AGCGCGGTCA CCTGGTTGAA ATTCTTGATC CGCTTTCTTG CTACATGAAC
ATAAATCCTG CGGCGTCTTC TATTCACTAC AAAGGCCGCA AGTTACCCCA TTTTGATGCT
GTGATCCCGC GTATTGGTAC CGCCATTACC TTTTATGGGA CGGCGGCACT GCGCCAGTTC
GAGATGCTGG GGAGCTATCC GCTCAATGAG TCGGTCGCCA TTGCCCGGGC GCGTGACAAA
TTGCGTTCGA TGCAACTGCT GGCGCGTCAG GGCATCGACC TGCCTGTCAC GGGCATTGCG
CATTCGCCGG ATGATACCAG CGATTTAATC GACATGGTCG GTGGTGCGCC GCTGGTGGTC
AAGTTGGTTG AAGGCACGCA GGGAATTGGC GTCGTGCTGG CGGAGACGCG TCAGGCGGCG
GAAAGCGTGA TTGACGCTTT CCGCGGTCTG AACGCGCATA TTCTGGTGCA GGAATATATC
AAAGAGGCGC AAGGGTGCGA TATCCGCTGT CTGGTTGTTG GCGATGAAGT GGTCGCTGCG
ATTGAACGGC GGGCGAAAGA GGGCGATTTT CGTTCCAATT TGCATCGTGG CGGCGTGGCA
AGCGTCGCCA GAATCACACC ACAGGAGCGT GAAATCGCGA TAAAAGCCGC GCGAACGATG
GCGCTGGACG TTGCTGGTGT GGATATTCTG CGTGCTAATC GCGGGCCGTT GGTGATGGAA
GTGAATGCGT CGCCAGGGCT GGAAGGAATA GAAAAAACCA CCGGTATCGA CATCGCGGGT
AAAATGATCC GCTGGATCGA ACGCCACGCT ACGACAGAAT ATTGCCTGAA AACGGGTGGC
TAG
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| Protein sequence | MKIAILSRDG TLYSCKRLRE AAIQRGHLVE ILDPLSCYMN INPAASSIHY KGRKLPHFDA
VIPRIGTAIT FYGTAALRQF EMLGSYPLNE SVAIARARDK LRSMQLLARQ GIDLPVTGIA
HSPDDTSDLI DMVGGAPLVV KLVEGTQGIG VVLAETRQAA ESVIDAFRGL NAHILVQEYI
KEAQGCDIRC LVVGDEVVAA IERRAKEGDF RSNLHRGGVA SVARITPQER EIAIKAARTM
ALDVAGVDIL RANRGPLVME VNASPGLEGI EKTTGIDIAG KMIRWIERHA TTEYCLKTGG
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