| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0837 |
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| Symbol | rhtA |
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| ID | 6146204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 840889 |
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| End bp | 841776 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641615725 |
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| Product | threonine and homoserine efflux system |
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| Protein accession | YP_001742917 |
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| Protein GI | 170684270 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0124814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGTT CATTACGTAA AATGCCGGTC TGGTTACCAA TAGTCATATT GCTCGTTGCC
ATGGCGTCTA TTCAGGGTGG AGCCTCGTTA GCTAAGTCAC TTTTTCCTCT GGTGGGCGCA
CCGGGGGTCA CTGCGCTGCG TCTGGCATTA GGCACGCTGA TCCTCATCGC GTTCTTTAAG
CCATGGCGAC TGCGCTTTGC CAAAGAGCAG CGGTTACTGC TGTTGTTTTA CGGCGTTTCG
CTGGGGGGGA TGAATTATCT TTTTTATCTT TCTATTCAGA CGGTACCGCT GGGTATTGCG
GTGGCGCTGG AGTTCACCGG ACCACTGGCG GTGGCGCTGT TCTCTTCTCG TCGCCCGGTA
GATTTCGTCT GGGTTGTTCT GGCGGTTCTT GGTCTGTGGT TCCTGCTACC GCTGGGGCAA
GACGTTTCCC ATGTCGATTT AACCGGCTGT GCGCTGGCTC TGGGGGCCGG GGCTTGTTGG
GCTATTTACA TTTTAAGTGG GCAACGCGCA GGAGCGGAAC ATGGCCCTGC GACGGTGGCA
ATTGGTTCGT TGATTGCAGC GTTAATTTTC GTGCCAATTG GAGTGCTTCA GGCTGGTGAA
GCACTCTGGC ACTGGTCGGT TATTCCATTG GGTCTGGCGG TCGCTATTCT CTCGACCGCT
CTGCCTTATT CGCTGGAAAT GATTGCCCTC ACCCGTTTGC CAACACGCAC ATTTGGTACG
CTAATGAGCA TGGAACCTGC GCTGGCTGCC GTTTCCGGGA TGATTTTCCT CGGAGAAACA
CTGACACCCA TACAGCTGCT GGCGCTCGGC GCTATCATCG CCGCTTCAAT GGGTTCTACG
CTGACAGTAC GCAAAGAGAG CAAAATAAAA GAATTAGACA TAAATTAA
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| Protein sequence | MPGSLRKMPV WLPIVILLVA MASIQGGASL AKSLFPLVGA PGVTALRLAL GTLILIAFFK
PWRLRFAKEQ RLLLLFYGVS LGGMNYLFYL SIQTVPLGIA VALEFTGPLA VALFSSRRPV
DFVWVVLAVL GLWFLLPLGQ DVSHVDLTGC ALALGAGACW AIYILSGQRA GAEHGPATVA
IGSLIAALIF VPIGVLQAGE ALWHWSVIPL GLAVAILSTA LPYSLEMIAL TRLPTRTFGT
LMSMEPALAA VSGMIFLGET LTPIQLLALG AIIAASMGST LTVRKESKIK ELDIN
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