Gene EcSMS35_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0809 
Symbol 
ID6143897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp811578 
End bp812282 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content49% 
IMG OID641615697 
Producthypothetical protein 
Protein accessionYP_001742889 
Protein GI170680930 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00257878 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAT TCCCACGTTC TGATTCAATC GTACAAACCC GAACTGGCCT GCAAACCTAT 
ATGGCACAGG TCTATGGCTG GATGACAGTA GGCTTGCTGC TTACTGCGTT TGTTGCCTGG
TATGCGGCTA ATTCCGCGGC CGTTATGGAG CTATTATTCA CCAACCGCAT CTTTTTAATT
GGTCTGGTAA TAGCACAATT AGCTCTGGTT ATTGTGTTAT CAGCGATGAT TCAAAAGCTG
AGCGCAGGTG TAACGACGAT GCTCTTTATG CTTTATTCCG CGCTGACTGG CCTGACGCTT
TCCAGTATTT TCATTGTCTA TACCGCTGCT TCTATCGCCA GTACTTTCGT CGTTACTGCC
GGGATGTTCG GCGCAATGAG CCTGTACGGT TACACCACGA AGCGCGATCT AAGTGGTTTC
GGCAATATGC TGTTTATGGC GTTGATCGGC ATTGTGCTGG CATCGCTGGT CAACTTCTGG
CTGAAAAGCG AAGCGTTGAT GTGGGCAGTC ACATACATCG GCGTGATTGT CTTTGTCGGA
TTGACGGCGT ATGACACCCA GAAACTGAAA AATATGGGTG AGCAGATTGA TACCCGCGAC
ACGTCGAACC TGCGCAAATA TTCCATTCTT GGCGCGTTGA CCTTGTATCT GGACTTCATC
AACCTGTTCC TGATGTTGCT GCGGATCTTC GGCAACCGCC GTTAA
 
Protein sequence
MDRFPRSDSI VQTRTGLQTY MAQVYGWMTV GLLLTAFVAW YAANSAAVME LLFTNRIFLI 
GLVIAQLALV IVLSAMIQKL SAGVTTMLFM LYSALTGLTL SSIFIVYTAA SIASTFVVTA
GMFGAMSLYG YTTKRDLSGF GNMLFMALIG IVLASLVNFW LKSEALMWAV TYIGVIVFVG
LTAYDTQKLK NMGEQIDTRD TSNLRKYSIL GALTLYLDFI NLFLMLLRIF GNRR