Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0809 |
Symbol | |
ID | 6143897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 811578 |
End bp | 812282 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641615697 |
Product | hypothetical protein |
Protein accession | YP_001742889 |
Protein GI | 170680930 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00257878 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAGAT TCCCACGTTC TGATTCAATC GTACAAACCC GAACTGGCCT GCAAACCTAT ATGGCACAGG TCTATGGCTG GATGACAGTA GGCTTGCTGC TTACTGCGTT TGTTGCCTGG TATGCGGCTA ATTCCGCGGC CGTTATGGAG CTATTATTCA CCAACCGCAT CTTTTTAATT GGTCTGGTAA TAGCACAATT AGCTCTGGTT ATTGTGTTAT CAGCGATGAT TCAAAAGCTG AGCGCAGGTG TAACGACGAT GCTCTTTATG CTTTATTCCG CGCTGACTGG CCTGACGCTT TCCAGTATTT TCATTGTCTA TACCGCTGCT TCTATCGCCA GTACTTTCGT CGTTACTGCC GGGATGTTCG GCGCAATGAG CCTGTACGGT TACACCACGA AGCGCGATCT AAGTGGTTTC GGCAATATGC TGTTTATGGC GTTGATCGGC ATTGTGCTGG CATCGCTGGT CAACTTCTGG CTGAAAAGCG AAGCGTTGAT GTGGGCAGTC ACATACATCG GCGTGATTGT CTTTGTCGGA TTGACGGCGT ATGACACCCA GAAACTGAAA AATATGGGTG AGCAGATTGA TACCCGCGAC ACGTCGAACC TGCGCAAATA TTCCATTCTT GGCGCGTTGA CCTTGTATCT GGACTTCATC AACCTGTTCC TGATGTTGCT GCGGATCTTC GGCAACCGCC GTTAA
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Protein sequence | MDRFPRSDSI VQTRTGLQTY MAQVYGWMTV GLLLTAFVAW YAANSAAVME LLFTNRIFLI GLVIAQLALV IVLSAMIQKL SAGVTTMLFM LYSALTGLTL SSIFIVYTAA SIASTFVVTA GMFGAMSLYG YTTKRDLSGF GNMLFMALIG IVLASLVNFW LKSEALMWAV TYIGVIVFVG LTAYDTQKLK NMGEQIDTRD TSNLRKYSIL GALTLYLDFI NLFLMLLRIF GNRR
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