| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0763 |
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| Symbol | tolB |
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| ID | 6143437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 770335 |
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| End bp | 771630 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615652 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001742851 |
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| Protein GI | 170683440 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000112892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGC AGGCATTACG AGTAGCATTT GGTTTTCTCA TACTGTGGGC ATCAGTTCTG
CATGCTGAAG TCCGCATTGT GATCGACAGC GGTGTAGATT CCGGTCGTCC TATTGGTGTT
GTTCCTTTCC AGTGGGCGGG GCCTGGTGCG GCACCTGAAG ATATTGGCGG CATCGTTGCT
GCTGACTTGC GTAACAGCGG TAAATTTAAT CCGTTAGATC GCGCTCGTCT GCCACAGCAG
CCGGGTAGTG CGCAGGAAGT ACAACCAGCT GCATGGTCCG CACTGGGCAT TGACGCTGTA
GTTGTCGGTC AGGTCACTCC GAATCCGGAC GGCTCTTACA ATGTTGCTTA TCAACTTGTT
GACACTGGCG GCGCACCGGG TACTGTACTT GCTCAGAACT CGTACAAAGT GAACAAGCAG
TGGCTGCGTT ATGCTGGTCA TACCGCCAGT GATGAAGTGT TTGAAAAACT GACCGGCATT
AAAGGTGCGT TCCGTACCCG TATTGCCTAC GTTGTTCAGA CCAACGGCGG TCAGTTCCCG
TATGAACTGC GCGTATCTGA CTATGACGGT TACAACCAGT TTGTCGTTCA CCGTTCACCG
CAGCCGCTGA TGTCTCCGGC GTGGTCACCA GACGGTTCTA AACTGGCTTA TGTGACCTTC
GAAAGCGGTC GTTCCGCGCT GGTTATTCAG ACGCTGGCAA ATGGCGCTGT ACGTCAGGTG
GCTTCATTCC CGCGTCACAA CGGTGCACCT GCATTCTCGC CAGACGGCAG CAAACTGGCA
TTCGCCTTGT CGAAAACCGG TAGTCTGAAC CTGTACGTAA TGGATTTGGC TTCTGGTCAG
ATCCGCCAGG TGACTGATGG TCGCAGTAAC AATACCGAAC CGACCTGGTT CCCGGATAGC
CAGAACCTGG CATTTACTTC TGACCAGGCC GGTCGTCCAC AGGTTTATAA AGTGAATATC
AACGGCGGTG CGCCACAACG TATTACCTGG GAAGGTTCGC AGAACCAGGA TGCGGATGTC
AGCAGCGACG GTAAATTTAT GGTAATGGTC AGCTCCAATG GTGGGCAGCA GCACATTGCC
AAACAAGATC TGGCAACGGG AGGCGTACAA GTTCTGTCGT CCACGTTCCT GGATGAAACG
CCAAGTCTGG CACCTAACGG CACTATGGTA ATCTACAGCT CTTCTCAGGG GATGGGATCC
GTGCTGAATT TGGTTTCTAC AGATGGGCGT TTCAAAGCGC GTCTTCCGGC AACTGATGGA
CAGGTCAAAT TCCCTGCCTG GTCGCCGTAT CTGTGA
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| Protein sequence | MMKQALRVAF GFLILWASVL HAEVRIVIDS GVDSGRPIGV VPFQWAGPGA APEDIGGIVA
ADLRNSGKFN PLDRARLPQQ PGSAQEVQPA AWSALGIDAV VVGQVTPNPD GSYNVAYQLV
DTGGAPGTVL AQNSYKVNKQ WLRYAGHTAS DEVFEKLTGI KGAFRTRIAY VVQTNGGQFP
YELRVSDYDG YNQFVVHRSP QPLMSPAWSP DGSKLAYVTF ESGRSALVIQ TLANGAVRQV
ASFPRHNGAP AFSPDGSKLA FALSKTGSLN LYVMDLASGQ IRQVTDGRSN NTEPTWFPDS
QNLAFTSDQA GRPQVYKVNI NGGAPQRITW EGSQNQDADV SSDGKFMVMV SSNGGQQHIA
KQDLATGGVQ VLSSTFLDET PSLAPNGTMV IYSSSQGMGS VLNLVSTDGR FKARLPATDG
QVKFPAWSPY L
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