| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0716 |
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| Symbol | kdpE |
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| ID | 6144837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 720292 |
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| End bp | 720969 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641615606 |
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| Product | DNA-binding transcriptional activator KdpE |
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| Protein accession | YP_001742805 |
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| Protein GI | 170682921 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0593355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.505732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACAAACG TTCTGATTGT TGAAGATGAA CAGGCTATTC GTCGCTTTCT GCGCACGGCG
CTGGAGGGCG ACGGGATGCG CGTCTTTGAG GCCGAAACGC TGCAACGCGG CTTGCTGGAA
GCGGCAACCC GTAAGCCAGA TTTGATTATT CTCGATCTCG GCCTGCCCGA TGGTGATGGG
ATTGAGTTTA TCCGCGACCT GCGCCAGTGG AGCGCGGTGC CGGTGATTGT GCTTTCCGCA
CGCAGCGAAG AGAGCGACAA AATCGCCGCA CTGGATGCCG GAGCGGATGA TTACCTGAGT
AAGCCGTTTG GCATTGGCGA ATTGCAGGCC CGTCTGCGCG TCGCTTTACG CCGCCACTCC
GCCACCACCG CGCCCGATCC GCTGGTGAAA TTTTCCGATG TGACCGTCGA TTTAGCCGCC
CGCGTGATTC ACCGGGGTGA GGAAGAGGTG CATCTCACGC CGATTGAATT CCGCCTGCTG
GCCGTGCTGC TCAACAACGC CGGAAAAGTG CTCACCCAGC GCCAGTTACT CAATCAGGTG
TGGGGACCAA ACGCGGTCGA ACACAGTCAT TATTTGCGTA TTTATATGGG GCATCTGCGA
CAAAAACTGG AGCAAGATCC CGCCCGCCCC CGCCATTTCA TTACTGAAAC CGGTATTGGG
TATCGGTTTA TGCTTTGA
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| Protein sequence | MTNVLIVEDE QAIRRFLRTA LEGDGMRVFE AETLQRGLLE AATRKPDLII LDLGLPDGDG
IEFIRDLRQW SAVPVIVLSA RSEESDKIAA LDAGADDYLS KPFGIGELQA RLRVALRRHS
ATTAPDPLVK FSDVTVDLAA RVIHRGEEEV HLTPIEFRLL AVLLNNAGKV LTQRQLLNQV
WGPNAVEHSH YLRIYMGHLR QKLEQDPARP RHFITETGIG YRFML
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