Gene EcSMS35_0696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0696 
SymbolnagC 
ID6146508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp699754 
End bp700974 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content54% 
IMG OID641615586 
ProductN-acetylglucosamine repressor 
Protein accessionYP_001742785 
Protein GI170681967 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00225291 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAG GCGGACAAGC TCAGATAGGT AATGTTGATC TCGTAAAACA GCTTAACAGC 
GCGGCGGTTT ATCGCCTGAT TGACCAGTAC GGGCCAATCT CGCGGATTCA GATTGCCGAG
CAAAGTCAGC TTGCCCCCGC CAGCGTAACC AAAATTACGC GTCAGCTTAT CGAACGCGGG
CTGATCAAAG AAGTTGATCA GCAGGCCTCC ACCGGGGGCC GCCGCGCTAT CTCTATCGTC
ACCGAAACCC GCAATTTCCA CGCAATCGGC GTACGGCTTG GTCGTCACGA CGCCACCATC
ACTCTGTTTG ATCTTAGTAG CAAAGTGCTG GCAGAAGAAC ATTACCCGCT GCCGGAACGT
ACCCAGCAGA CGCTGGAACA TGCCCTGCTG AATGCCATTG CTCAGTTTAT TGATAGCTAC
CAGCGCAAGC TGCGCGAGCT GATCGCCATT TCCGTGATCC TGCCAGGGCT TGTTGACCCG
GACAGCGGTA AAATTCATTA CATGCCGCAT ATTCAGGTGG AAAACTGGGG GCTGGTAGAA
GCACTGGAAG AGCGTTTTAA AGTGACCTGT TTTGTCGGCC ACGATATCCG CAGTCTGGCG
CTGGCAGAGC ACTACTTCGG TGCAAGTCAG GATTGCGAAG ACTCCATTCT GGTGCGTGTC
CATCGCGGAA CCGGGGCCGG GATTATCTCT AACGGGCGAA TTTTTATCGG GCGCAACGGC
AACGTCGGTG AAATTGGCCA TATTCAGGTC GAACCGCTGG GTGAACGCTG CCACTGTGGC
AACTTTGGCT GCCTGGAAAC TATCGCCGCC AACGCTGCCA TTGAACAACG GGTGTTGAAT
CTGTTAAAGC AGGGCTACCA GAGCCGCGTG CCGCTGGACG ACTGCACCAT CAAAACTATC
TGCAAAGCCG CGAACAAAGG CGATAGCCTG GCGTCGGAAG TGATTGAGTA TGTCGGTCGT
CATCTGGGCA AAACCATCGC CATTGCCATC AACCTGTTTA ACCCGCAAAA GATTGTTATT
GCCGGAGAAA TCACCGAAGC CGATAAAGTG CTGCTCCCTG CTATTGAAAG CTGCATTAAT
ACCCAGGCGC TGAAGGCGTT TCGTACTAAT CTGCCGGTGG TACGTTCTGA GCTGGATCAC
CGCTCGGCAA TCGGCGCTTT TGCGCTGGTA AAACGCGCCA TGCTCAACGG TATTTTGCTC
CAGCATTTGC TGGAAAATTA A
 
Protein sequence
MTPGGQAQIG NVDLVKQLNS AAVYRLIDQY GPISRIQIAE QSQLAPASVT KITRQLIERG 
LIKEVDQQAS TGGRRAISIV TETRNFHAIG VRLGRHDATI TLFDLSSKVL AEEHYPLPER
TQQTLEHALL NAIAQFIDSY QRKLRELIAI SVILPGLVDP DSGKIHYMPH IQVENWGLVE
ALEERFKVTC FVGHDIRSLA LAEHYFGASQ DCEDSILVRV HRGTGAGIIS NGRIFIGRNG
NVGEIGHIQV EPLGERCHCG NFGCLETIAA NAAIEQRVLN LLKQGYQSRV PLDDCTIKTI
CKAANKGDSL ASEVIEYVGR HLGKTIAIAI NLFNPQKIVI AGEITEADKV LLPAIESCIN
TQALKAFRTN LPVVRSELDH RSAIGAFALV KRAMLNGILL QHLLEN