| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0656 |
|---|
| Symbol | |
|---|
| ID | 6143882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 668852 |
|---|
| End bp | 669319 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641615546 |
|---|
| Product | rRNA large subunit methyltransferase |
|---|
| Protein accession | YP_001742752 |
|---|
| Protein GI | 170681791 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000108281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTGC AACTTGTCGC CGTGGGAACG AAAATGCCGG ACTGGGTACA AACCGGTTTT
ACCGAGTACC TGCGTCGTTT TCCGAAAGAT ATGCCCTTCG AGCTGATTGA AATTCCGGCC
GGAAAACGCG GCAAGAATGC GGACATCAAG CGCATACTCG ACAAAGAGGG TGAGCAGATG
TTGGCGGCCG CAGGCAAAAA CCGCATTGTC ACCCTCGATA TTCCAGGCAA GCCCTGGGAT
ACGCCGCAGT TAGCCGCTGA GCTGGAACGC TGGAAGCTGG ATGGTCGCGA CGTCAGTCTA
CTGATTGGCG GGCCTGAAGG GTTGTCGCCT GCCTGTAAAG CGGCGGCTGA GCAGAGCTGG
TCGCTGTCGG CGCTTACCCT CCCCCATCCG CTGGTTCGCG TGCTGGTCGC AGAGAGTCTG
TACCGGGCGT GGAGCATCAC CACCAACCAT CCTTATCACC GTGAGTGA
|
|---|
| Protein sequence | MKLQLVAVGT KMPDWVQTGF TEYLRRFPKD MPFELIEIPA GKRGKNADIK RILDKEGEQM
LAAAGKNRIV TLDIPGKPWD TPQLAAELER WKLDGRDVSL LIGGPEGLSP ACKAAAEQSW
SLSALTLPHP LVRVLVAESL YRAWSITTNH PYHRE
|
|---|
| |