Gene EcSMS35_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0646 
Symbol 
ID6143433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp658632 
End bp659420 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content53% 
IMG OID641615536 
Productcarbon-nitrogen family hydrolase 
Protein accessionYP_001742742 
Protein GI170683299 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00242318 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTG CCGCAGGACA GTTTGCTGTG ACATCTGTGT GGGAAAAGAA CGCTGAGATT 
TGTGCCTCGT TGATGGCGCA GGCGGCGGAA AACGACGTTT CGCTGTTTGT CCTGCCGGAA
GCATTGTTGG CGCGTGATGA TCATGATGCA GATCTATCGG TTAAATCAGC ACAGCTGCTG
GAAGGCGAAT TCCTCGGACG TTTACGTCGA GAAAGTAAAC GTAACATGAT GACGACAATT
CTGACGATTC ATGTTCCTTC AACGCCGGGG CGCGCATGGA ATATGCTGGT GGCGCTACAG
GCAGGAAACA TCGTCGCCCG TTATGCCAAA CTTCATCTCT ATGATGCATT TGCCATTCAG
GAATCACGCC ATGTTGATGC TGGTAATGAA ATAGCTCCGT TACTGGAGGT GGAAGGGATG
AAGGTCGGTC TGATGACCTG TTATGACTTA CGCTTTCCAG AGCTGGCGCT GGCACAGGCA
TTACAGGGAG CTGAAATCCT GGTACTTCCT GCTGCCTGGG TTCGTGGGCC GCTCAAAGAG
CATCACTGGT CAACGTTGCT TGCCGCTCGT GCGCTGGATA CCACCTGTTA TATGGTGGCG
GCGGGGGAGT GCGGGAACAA AAATATCGGG CAAAGCCGGA TTATAGATCC CTTTGGCGTC
ACCATTGCGG CAGCGTCAGA AATGCCTGCA CTCATTATGG CGGAAGTGAC GCCCGAACGT
GTGCGTCAGG TGCGCGCGCA ACTGCCCGTC TTAAACAACC GTCGCTTTGC GCCGCCGCAA
TTATTATGA
 
Protein sequence
MLVAAGQFAV TSVWEKNAEI CASLMAQAAE NDVSLFVLPE ALLARDDHDA DLSVKSAQLL 
EGEFLGRLRR ESKRNMMTTI LTIHVPSTPG RAWNMLVALQ AGNIVARYAK LHLYDAFAIQ
ESRHVDAGNE IAPLLEVEGM KVGLMTCYDL RFPELALAQA LQGAEILVLP AAWVRGPLKE
HHWSTLLAAR ALDTTCYMVA AGECGNKNIG QSRIIDPFGV TIAAASEMPA LIMAEVTPER
VRQVRAQLPV LNNRRFAPPQ LL