Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0646 |
Symbol | |
ID | 6143433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 658632 |
End bp | 659420 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615536 |
Product | carbon-nitrogen family hydrolase |
Protein accession | YP_001742742 |
Protein GI | 170683299 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00242318 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTG CCGCAGGACA GTTTGCTGTG ACATCTGTGT GGGAAAAGAA CGCTGAGATT TGTGCCTCGT TGATGGCGCA GGCGGCGGAA AACGACGTTT CGCTGTTTGT CCTGCCGGAA GCATTGTTGG CGCGTGATGA TCATGATGCA GATCTATCGG TTAAATCAGC ACAGCTGCTG GAAGGCGAAT TCCTCGGACG TTTACGTCGA GAAAGTAAAC GTAACATGAT GACGACAATT CTGACGATTC ATGTTCCTTC AACGCCGGGG CGCGCATGGA ATATGCTGGT GGCGCTACAG GCAGGAAACA TCGTCGCCCG TTATGCCAAA CTTCATCTCT ATGATGCATT TGCCATTCAG GAATCACGCC ATGTTGATGC TGGTAATGAA ATAGCTCCGT TACTGGAGGT GGAAGGGATG AAGGTCGGTC TGATGACCTG TTATGACTTA CGCTTTCCAG AGCTGGCGCT GGCACAGGCA TTACAGGGAG CTGAAATCCT GGTACTTCCT GCTGCCTGGG TTCGTGGGCC GCTCAAAGAG CATCACTGGT CAACGTTGCT TGCCGCTCGT GCGCTGGATA CCACCTGTTA TATGGTGGCG GCGGGGGAGT GCGGGAACAA AAATATCGGG CAAAGCCGGA TTATAGATCC CTTTGGCGTC ACCATTGCGG CAGCGTCAGA AATGCCTGCA CTCATTATGG CGGAAGTGAC GCCCGAACGT GTGCGTCAGG TGCGCGCGCA ACTGCCCGTC TTAAACAACC GTCGCTTTGC GCCGCCGCAA TTATTATGA
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Protein sequence | MLVAAGQFAV TSVWEKNAEI CASLMAQAAE NDVSLFVLPE ALLARDDHDA DLSVKSAQLL EGEFLGRLRR ESKRNMMTTI LTIHVPSTPG RAWNMLVALQ AGNIVARYAK LHLYDAFAIQ ESRHVDAGNE IAPLLEVEGM KVGLMTCYDL RFPELALAQA LQGAEILVLP AAWVRGPLKE HHWSTLLAAR ALDTTCYMVA AGECGNKNIG QSRIIDPFGV TIAAASEMPA LIMAEVTPER VRQVRAQLPV LNNRRFAPPQ LL
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