| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0638 |
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| Symbol | dpiB |
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| ID | 6145500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 651634 |
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| End bp | 653292 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641615530 |
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| Product | sensor histidine kinase DpiB |
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| Protein accession | YP_001742736 |
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| Protein GI | 170681994 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.736103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAGC TTAACGAGAA TAAACAGTTT GCATTTTTCC AAAGACTGGC ATTTCCGCTG
CGTATCTTTT TGCTGATTCT GGTGTTCTCA ATATTTGTCA TTGCAGCCCT GGCGCAATAT
TTTACAGCCA GTTTTGAGGA CTATTTAACG CTTCATGTGC GCGACATGGC AATGAATCAG
GCAAAAATTA TTGCTTCTAA TGACAGTATC ATCAGCGCAG TGAAAACGCG TGACTACAAG
AGGCTGGCGA CCATCGCTGA CAAATTACAA AGAGATACTG ATTTCGATTA TGTGGTGATT
GGCGATCGGC ACTCGATTCG TCTTTACCAT CCTAATCCGG AGAAAATTGG TTATCCTATG
CAGTTCACCA AACCGGGCGC GCTGGAGAAA GGGGAGAGCT ACTTCATCAC CGGGAAAGGG
TCAATTGGCA TGGCGATGCG TGCCAAAACG CCAATCTTTG ATGACGATGG AAAAGTCATC
GGCGTGGTGT CGATTGGCTA CCTGGTGAGT AAAATCGATA GCTGGCGGGC TGAGTTTTTA
TTACCGATGG CTGGCGTGTT TGTCGTGCTG TTAGGGATTC TGATGTTGCT ATCGTGGTTC
CTGGCCGCGC ATATCCGTCG GCAGATGATG GGCATGGAGC CAAAGCAAAT CGCACGCGTG
GTCCGTCAGC AAGAGGCGCT GTTTAGTTCG GTTTATGAAG GGCTCATTGC GGTGGATCCG
CATGGTTACA TTACCGCCAT CAATCGTAAC GCAAGAAAGA TGCTGGGTCT GAGTTCCCCC
GGACGGCAAT GGTTGGGTAA ACCCATTGCT GAAGTGGTCA GGCCCGCCGA TTTCTTTACC
GAACAGATTG ATGAAAAACG TCAGGATGTG GTGGCGAACT TTAACGGTCT GAGCGTTATT
GCCAACCGGG AAGCTATTCG TTCTGGTGAT GATTTGCTGG GGGCCATTAT CAGCTTTCGT
AGTAAAGACG AAATATCCAC CCTCAATGCG CAACTGACGC AAATTAAACA ATACGTCGAG
AGCCTGCGCA CATTGCGACA CGAGCATCTC AATTGGATGT CGACGCTCAA TGGTCTGTTG
CAGATGAAAG AGTATGATCG CGTGCTGGCG ATGGTGCAGG GGGAGTCTCA GGCCCAGCAA
CAGCTTATTG ATAGCCTGCG CGAGGCGTTT GCCGATCGCC AGGTGGCGGG GCTGCTTTTT
GGTAAAGTGC AGCGCGCCCG CGAACTGGGG CTAAAAATGG TCATCGTCCC CGGAAGTCAG
CTTTCGCAAC TGCCGCCAGG ACTGGACAGC ACCGAGTTTG CAGCCATTGT TGGCAATTTA
CTTGATAACG CCTTCGAAGC CAGCCTACGT AGCGATGAAG GAAACAAGAT CGTTGAATTA
TTCCTCAGCG ATGAAGGCGA TGATGTGGTG ATTGAAGTCG CCGATCAGGG CTGCGGCGTT
CCAGAGTCTC TACGAGACAA AATATTTGAG CAGGGTGTCA GTACGCGTGC TGACGAGCCC
GGCGAACATG GCATTGGGTT GTACTTGATT GCCAGCTACG TAACGCGCTG CGGTGGTGTT
ATCACTCTCG AAGATAATGA TCCCTGCGGT ACCTTATTTT CAATCTATAT TCCGAAAGTG
AAACCTAATG ACAGCTCCAT TAACCCTATT GATCGTTGA
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| Protein sequence | MLQLNENKQF AFFQRLAFPL RIFLLILVFS IFVIAALAQY FTASFEDYLT LHVRDMAMNQ
AKIIASNDSI ISAVKTRDYK RLATIADKLQ RDTDFDYVVI GDRHSIRLYH PNPEKIGYPM
QFTKPGALEK GESYFITGKG SIGMAMRAKT PIFDDDGKVI GVVSIGYLVS KIDSWRAEFL
LPMAGVFVVL LGILMLLSWF LAAHIRRQMM GMEPKQIARV VRQQEALFSS VYEGLIAVDP
HGYITAINRN ARKMLGLSSP GRQWLGKPIA EVVRPADFFT EQIDEKRQDV VANFNGLSVI
ANREAIRSGD DLLGAIISFR SKDEISTLNA QLTQIKQYVE SLRTLRHEHL NWMSTLNGLL
QMKEYDRVLA MVQGESQAQQ QLIDSLREAF ADRQVAGLLF GKVQRARELG LKMVIVPGSQ
LSQLPPGLDS TEFAAIVGNL LDNAFEASLR SDEGNKIVEL FLSDEGDDVV IEVADQGCGV
PESLRDKIFE QGVSTRADEP GEHGIGLYLI ASYVTRCGGV ITLEDNDPCG TLFSIYIPKV
KPNDSSINPI DR
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