Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0620 |
Symbol | |
ID | 6144000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 633243 |
End bp | 634331 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641615512 |
Product | hypothetical protein |
Protein accession | YP_001742718 |
Protein GI | 170684067 |
COG category | [C] Energy production and conversion |
COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.505795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCACA ATCCTATCCG CGTGGTCGTC GGCCCGGCTA ACTACTTTTC ACATCCCGGA AGTTTCAATC ACCTGCACGA TTTTTTCACT GATGAACAAC TTTCTCGCGC GGCGTGGATC TACGGCGAAC GCGCCATTGC TGCGGCGCAA ACAAAACTTC CGCCAGCGTT TGAACTGCCA GGGGCAAAGC ATATTTTGTT TCGTGGTCAT TGCAGCGAAA GCGATGTACA ACAACTGGCG GCTGAGTCCG GTGACGATCG CAGCGTGGTG ATTGGCGTCG GCGGCGGCGC ACTGCTCGAC ACCGCGAAAG CCCTCGCCCG CCGTCTCGGT CTGCCGTTTG TTGCCGTTCC GACGATCGCC GCTACCTGCG CAGCCTGGAC ACCGCTCTCT GTCTGGTACA ACGATGCCGG ACAAGCGCTG CATTATGAGA TTTTCGACGA CGCCAATTTT ATGGTGCTGG TGGAACCGGA GATTATCCTC AACGCGCCGC AAGAATATCT GCTGGCGGGG ATCGGTGACA CGCTGGCGAA ATGGTATGAA GCGGTGGTGC TGGCCCCGCA ACCAGAAACG TTGCCGTTAA CCGTGCGGCT GGGGATTAAT AACGCGCAGG CCATTCGCGA CGTCTTGTTA AACAGTAGCG AACAGGCGCT TGCCGATCAG CAAAATCACC AGTTAACGCA ATCATTTTGC GATGTGGTGG ATGCCATTAT TGCTGGTGGT GGGATGGTTG GTGGTCTGGG CGATCGTTTT ACGCGTGTGG CGGCAGCTCA TGCCGTGCAT AACGGTCTGA CCGTGCTGCC GCAAACCGAG AAGTTTCTCC ACGGCACCAA AGTCGCCTAC GGAATTCTGG TGCAAAGCGC CTTGCTGGGT CAGGATGATG TGCTGGCGCA ATTAACTGGA GCGTATCAGC GTTTTCATCT GCCGACTACG CTGGCGGAGC TGGAAGTGGA TATCAATAAT CAGGCGGAGA TCGACAAAGT GATTGCCCAC ACCTTACGTC CGGTGGAATC CATTCATTAC CTGCCGGTCA CGCTGACACC AGATACGTTG CGTGCAGCGT TCGAAAAAGT GGAATCGTTT AAAGCCTGA
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Protein sequence | MPHNPIRVVV GPANYFSHPG SFNHLHDFFT DEQLSRAAWI YGERAIAAAQ TKLPPAFELP GAKHILFRGH CSESDVQQLA AESGDDRSVV IGVGGGALLD TAKALARRLG LPFVAVPTIA ATCAAWTPLS VWYNDAGQAL HYEIFDDANF MVLVEPEIIL NAPQEYLLAG IGDTLAKWYE AVVLAPQPET LPLTVRLGIN NAQAIRDVLL NSSEQALADQ QNHQLTQSFC DVVDAIIAGG GMVGGLGDRF TRVAAAHAVH NGLTVLPQTE KFLHGTKVAY GILVQSALLG QDDVLAQLTG AYQRFHLPTT LAELEVDINN QAEIDKVIAH TLRPVESIHY LPVTLTPDTL RAAFEKVESF KA
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