Gene EcSMS35_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0613 
SymbolentC 
ID6146295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp625809 
End bp626984 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content56% 
IMG OID641615505 
Productisochorismate synthase, entC 
Protein accessionYP_001742711 
Protein GI170684126 
COG category[H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1169] Isochorismate synthase 
TIGRFAM ID[TIGR00543] isochorismate synthases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.900668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGT CACTGGCTGA GGAAGTACAG CAGACCATGG CAACACTTGC GCCCAATCGC 
TTTTTCTTTA TGTCGCCGTA CCGCAGTTTT ACGACGTCAG GATGTTTCGC CCGCTTCGAT
GAACCGGCTG TGAACGGGGA TTCGCCCGAC AGTCCCTTCC AGCAAAAACT CGCCGCGTTG
TTTGCCGATG CCAAAGCGCA GGGCATCAAA AATCCGGTGA TGGTCGGGGC GATTCCCTTC
GATCCACGTC AGCCTTCGTC GCTGTATATT CCCGAATCCT GGCTGTCGTT CTCCCGTCAG
GAAAAACAAG CTTCCGCACG CCGTTTCACC CGCAGCCAGT CGCTGAACGT GGTGGAACGT
CAGGCAATTC CGCAACAAGC CACGTTTGAA CAGATGGTTG CCCGCGCCGC CGCACTTACC
GCCACGCCGC AGGTCGACAA AGTGGTGTTG TCACGGTTGA TTGATATCAC CACTGACGCC
GCCATTGATA GTGGCGTATT GCTGGAACGG TTGATTGCAC AAAACCCGGT TAGTTACAAC
TTCCATGTCC CGCTGGCTGA TGGTGGCGTT CTGCTGGGGG CCAGCCCGGA GCTGCTGCTA
CGTAAAGACG GCGAGCGTTT TAGCTCCATT CCGTTAGCCG GTTCCGCGCG TCGTCAGCCG
GATGAAGTGC TCGATCGCGA AGCGGGTAAT CGTCTGTTGG CCTCAGAAAA AGATCGTCAT
GAACATGAAT TGGTGACTCA GGCGATGAAA GAGGTACTGC GAGAACGCAG CAGTGAGTTA
AACGTTCCTT CCTCTCCACA ATTGATTACC ACGCCGACGC TGTGGCATCT CGCAACTCCC
TTTGAAGGTA AAGCGAATTC GCAAGAAAAC GCACTGACTC TGGCCTGTCT GCTGCATCCG
ACCCCCGCGC TGAGCGGTTT CCCGCATCAG GCCGCGACCC AGGTTATTGC TGAACTGGAG
CCGTTCGACC GCGAACTGTT TGGCGGCATT GTGGGTTGGT GTGACAGCGA AGGTAACGGC
GAATGGGTTG TGACCATCCG CTGCGCGAAG CTGCGGGAAA ATCAGGTGCG TCTGTTTGCC
GGAGCGGGGA TTGTGCCTGC GTCGTCACCG TTGGGTGAGT GGCGCGAAAC GGGCGTCAAA
CTTTCTACCA TGTTGAACGT TTTTGGATTG CATTAA
 
Protein sequence
MDTSLAEEVQ QTMATLAPNR FFFMSPYRSF TTSGCFARFD EPAVNGDSPD SPFQQKLAAL 
FADAKAQGIK NPVMVGAIPF DPRQPSSLYI PESWLSFSRQ EKQASARRFT RSQSLNVVER
QAIPQQATFE QMVARAAALT ATPQVDKVVL SRLIDITTDA AIDSGVLLER LIAQNPVSYN
FHVPLADGGV LLGASPELLL RKDGERFSSI PLAGSARRQP DEVLDREAGN RLLASEKDRH
EHELVTQAMK EVLRERSSEL NVPSSPQLIT TPTLWHLATP FEGKANSQEN ALTLACLLHP
TPALSGFPHQ AATQVIAELE PFDRELFGGI VGWCDSEGNG EWVVTIRCAK LRENQVRLFA
GAGIVPASSP LGEWRETGVK LSTMLNVFGL H