| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0580 |
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| Symbol | fimZ |
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| ID | 6143584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 587760 |
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| End bp | 588392 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641615472 |
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| Product | transcriptional regulator FimZ |
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| Protein accession | YP_001742679 |
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| Protein GI | 170681356 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACCAA CGTCGGTGAT CATTATGGAT ACTCATCCTA TCATCAGAAT GTCTATTGAA
GTTCTGTTGC AAAAAAACAA TGAATTGCAA ATTGTCCTGA AAACGGATGA TTATCGCATA
ACCATCGATT ATCTCCGAAC CCGTCCTGTT GATTTAATCA TTATGGATAT AGACTTGCCC
GGAACAGACG GTTTTACCTT CCTGAAAAGG ATCAAACAAA TCCAGAGTAC AGTGAAAGTA
TTATTTTTAT CATCGAAATC AGAATGCTTT TATGCTGGCA GAGCGATACA AGCTGGTGCT
AACGGTTTTG TCAGTAAATG CAATGATCAG AATGATATTT TTCATGCCGT TCAGATGATC
CTCTCCGGAT ACACTTTTTT TCCCAGCGAA ACGCTCAACT ATATAAAAAG CAATAAATGT
AGTACGAATA GTTCAACGGT CACTGTGCTA TCTAATCGTG AAGTAACCAT ATTACGTTAT
CTGGTTAGCG GATTATCTAA TAAAGAAATT GCCGATAAGT TATTACTTAG CAATAAAACA
GTTAGTGCAC ATAAATCTAA TATTTATGGC AAGCTAGGTT TGCATTCAAT TGTAGAGCTT
ATCGACTACG CCAAATTATA TGAATTAATA TAA
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| Protein sequence | MKPTSVIIMD THPIIRMSIE VLLQKNNELQ IVLKTDDYRI TIDYLRTRPV DLIIMDIDLP
GTDGFTFLKR IKQIQSTVKV LFLSSKSECF YAGRAIQAGA NGFVSKCNDQ NDIFHAVQMI
LSGYTFFPSE TLNYIKSNKC STNSSTVTVL SNREVTILRY LVSGLSNKEI ADKLLLSNKT
VSAHKSNIYG KLGLHSIVEL IDYAKLYELI
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