Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0537 |
Symbol | |
ID | 6145123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 544643 |
End bp | 545101 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641615431 |
Product | nodulation efficiency family protein |
Protein accession | YP_001742638 |
Protein GI | 170680890 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGAGT TAATGGTCGT TCATCCACAT ATTTTCTGGC TCAGTCTCGG CGGGTTGCTG CTGGCAGCCG AGATGCTGGG CGGAAATGGT TATTTGTTGT GGAGCGGCGT GGCAGCGGTG ATTACCGGCC TGGTGGTCTG GCTGGTGCCG CTGGGTTGGG AGTGGCAAGG GGTGATGTTT GCCATCCTGA CGCTGCTCGC CGCCTGGCTG TGGTGGAAAT GGTTGTCGCG GCGGGTGCGC GAACAAAAGC ACAGCGACAG TCATTTAAAC CAGCGCGGGC AGCAGCTGAT TGGCCGACGT TTTGTGCTGG AATCTCCGCT GGTCAACGGG CGCGGTCATA TGCGCGTCGG CGACAGTTCA TGGCCTGTCA GCGCCAGCGA GGATCTCGGT GCAGGTACGC ATGTTGAAGT CATTGCGATA GAAGGGATAA CGCTGATCAT CCGTGCGGTC ATCGCCTGA
|
Protein sequence | MMELMVVHPH IFWLSLGGLL LAAEMLGGNG YLLWSGVAAV ITGLVVWLVP LGWEWQGVMF AILTLLAAWL WWKWLSRRVR EQKHSDSHLN QRGQQLIGRR FVLESPLVNG RGHMRVGDSS WPVSASEDLG AGTHVEVIAI EGITLIIRAV IA
|
| |