Gene EcSMS35_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0525 
Symbol 
ID6147066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp534809 
End bp535288 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content50% 
IMG OID641615419 
Producthypothetical protein 
Protein accessionYP_001742626 
Protein GI170683758 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG CAGTTAAATT ACTCGAAAAA AACAAGATTT CGTTTCAAAT CCATACCTAC 
GAGCACGATC CGGCTGAAAC CAATTTTGGC GATGAAGTCG TCAAAAAATT AGGTTTGAAT
CCGGATCAGG TCTACAAAAC ACTGCTGGTC GCAGTGAACG GTGATATGAA ACACCTTGCC
GTGGTCGTTA CGCCGGTCGC AGGTCAACTG GATCTTAAAA AAGTAGCAAA AGCGCTGGGT
GCCAAGAAAG TTGAGATGGC CGATCCGATG GTTGCGCAGC GTTCGACGGG ATATCTGGTT
GGGGGGATTA GCCCACTGGG GCAGAAAAAA CGTCTGCCAA CGATTATCGA CGCCCCCGCA
CAAGAATTTG CCACTATTTA TGTTTCCGGC GGCAAGCGCG GGCTGGATAT CGAACTGGCG
GCAGGCGATC TGGCAAAGAT CCTCGATGCC AAATTTGCTG ATATCGCCCG CCGCGATTAA
 
Protein sequence
MTPAVKLLEK NKISFQIHTY EHDPAETNFG DEVVKKLGLN PDQVYKTLLV AVNGDMKHLA 
VVVTPVAGQL DLKKVAKALG AKKVEMADPM VAQRSTGYLV GGISPLGQKK RLPTIIDAPA
QEFATIYVSG GKRGLDIELA AGDLAKILDA KFADIARRD