Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0513 |
Symbol | dnaX |
ID | 6143044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 520405 |
End bp | 522336 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641615407 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_001742614 |
Protein GI | 170681602 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0325277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTATC AGGTCTTAGC CCGAAAATGG CGCCCACAAA CCTTTGCTGA CGTCGTCGGC CAGGAACATG TGCTGACCGC ACTGGCGAAC GGCTTGTCGT TAGGGCGTAT TCATCATGCT TATCTTTTTT CCGGTACCCG TGGCGTCGGA AAAACCTCTA TCGCCCGACT GCTGGCGAAG GGGCTAAACT GCGAAACCGG CATTACCGCG ACGCCGTGCG GCGTGTGCGA TAACTGTCGT GAAATCGAGC AGGGGCGCTT TGTCGATCTG ATTGAAATCG ACGCCGCCTC GCGTACTAAA GTTGAAGACA CTCGCGACCT GCTGGATAAC GTCCAGTACG CTCCGGCGCG TGGTCGTTTC AAAGTTTATC TCATCGACGA AGTGCATATG CTGTCGCGCC ACAGCTTTAA CGCACTGTTA AAAACCCTTG AAGAGCCGCC GGAGCACGTT AAGTTTCTGC TGGCGACGAC CGATCCGCAG AAATTGCCGG TGACGATTTT GTCGCGCTGT CTGCAATTCC ATCTCAAGGC GCTGGATGTC GAGCAAATTC GCCATCAGCT TGAGCACATC CTCAACGAAG AACATATCGC TCACGAGCCG CGGGCGTTGC AATTACTGGC GCGCGCCGCT GAAGGCAGCT TGCGAGATGC CTTAAGTCTG ACCGACCAGG CGATTGCCAG CGGTGACGGC CAGGTTTCAA CCCAGGCCGT CAGTGCGATG CTGGGTACGC TTGACGACGA TCAGGCGTTG TCGCTGGTTG AAGCGATGGT CGAGGCCAAC GGCGAGCGCG TAATGGCGCT AATTAATGAA GCTGCTGCCC GTGGTATCGA GTGGGAAGCG TTGCTGGTGG AAATGCTCGG TTTGTTGCAT CGTATTGCGA TGGTACAACT TTCGCCTGCT GCACTTGGCA ACGACATGGC CGCCATCGAG CTGCGGATGC GTGAACTGGC GCGTACCATA CCGCCGACGG ATATTCAGCT TTACTATCAA ACGCTGTTGA TTGGTCGCAA AGAATTACCG TATGCGCCGG ACCGCCGCAT GGGCGTTGAG ATGACGCTGC TGCGCGCGCT GGCGTTCCAT CCGCGTATGC CTCTGCCTGA GCCAGAAGTG CCACGCCAGT CCTTTGCGCC CGTTGCGCCA ACGGCAGTAA TGACGCCAAC CCAGGTGCCG CCGCAACCGC AATCAGCGCC GCAGCAGGCA CCGACTGTAC CGCTCCCGGA AACCACCAGC CAGGTGCTGG CGGCGCGCCA GCAGTTGCAG CGCGTGCAGG GAGCAACCAA AGCAAAAAAG AGTGAACCGG CAGCCGCTAC CCGCGCGCGG CCGGTGAATA ACGCTGCGCT GGAAAGACTG GCTTCGGTCA CCGATCGCGT TCAGGCGCGC CCGGTGCCAT CGGCGCTGGA AAAAGCGCCA GCCAAAAAAG AAGCGTATCG CTGGAAGGCG ACCACTCCAG TGATGCAGCA AAAAGAAGTG GTCGCCACGC CGAAGGCGCT GAAAAAAGCG CTGGAACATG AAAAAACGCC GGAACTGGCG GCGAAGCTGG CGGCAGAAGC CATTGAGCGC GACCCGTGGG CGGCTCAGGT GAGTCAACTT TCGCTACCAA AACTGGTCGA ACAGGTGGCG TTAAATGCCT GGAAAGAGGA GAGCGACAAC GCAGTATGTC TGCATTTGCG CTCCTCTCAG CGGCATTTGA ACAACCGCGG CGCACAGCAA AAACTGGCTG AAGCGTTGAG CACGTTAAAA GGTTCAACGG TTGAACTGAC TATCGTTGAA GATGATAATC CCGCGGTGCG TACGCCGCTG GAATGGCGTC AGGCGATATA CGAAGAAAAA CTTGCGCAGG CGCGCGAGTC CATTATTGCG GATAATAATA TTCAGACCCT GCGTCGATTC TTCGATGCGG AGCTGGATGA AGAAAGTATC CGCCCCATTT GA
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Protein sequence | MSYQVLARKW RPQTFADVVG QEHVLTALAN GLSLGRIHHA YLFSGTRGVG KTSIARLLAK GLNCETGITA TPCGVCDNCR EIEQGRFVDL IEIDAASRTK VEDTRDLLDN VQYAPARGRF KVYLIDEVHM LSRHSFNALL KTLEEPPEHV KFLLATTDPQ KLPVTILSRC LQFHLKALDV EQIRHQLEHI LNEEHIAHEP RALQLLARAA EGSLRDALSL TDQAIASGDG QVSTQAVSAM LGTLDDDQAL SLVEAMVEAN GERVMALINE AAARGIEWEA LLVEMLGLLH RIAMVQLSPA ALGNDMAAIE LRMRELARTI PPTDIQLYYQ TLLIGRKELP YAPDRRMGVE MTLLRALAFH PRMPLPEPEV PRQSFAPVAP TAVMTPTQVP PQPQSAPQQA PTVPLPETTS QVLAARQQLQ RVQGATKAKK SEPAAATRAR PVNNAALERL ASVTDRVQAR PVPSALEKAP AKKEAYRWKA TTPVMQQKEV VATPKALKKA LEHEKTPELA AKLAAEAIER DPWAAQVSQL SLPKLVEQVA LNAWKEESDN AVCLHLRSSQ RHLNNRGAQQ KLAEALSTLK GSTVELTIVE DDNPAVRTPL EWRQAIYEEK LAQARESIIA DNNIQTLRRF FDAELDEESI RPI
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