Gene EcSMS35_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0511 
Symbol 
ID6144517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp519195 
End bp519572 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content52% 
IMG OID641615405 
Producthypothetical protein 
Protein accessionYP_001742612 
Protein GI170684286 
COG category[S] Function unknown 
COG ID[COG2832] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000222622 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAA TCATTTTAAT CATCATTGGC TGGCTGGCGG TAGTGCTGGG TACGCTGGGC 
GTGGTATTAC CGGTATTACC GACGACGCCG TTTATCCTGC TGGCGGCCTG GTGCTTTGCC
CGTTCTTCCC CGCGCTTTCA CGCCTGGTTG CTGTACCGCT CATGGTTTGG CAGCTATCTA
CGTTTCTGGC AGAAACATCA TGCGATGCCG CGCGGCGTCA AACCGCGGGC GATTTTGCTT
ATTTTGCTCA CGTTTGCCAT TTCTCTGTGG TTCGTCCAGA TGCCATGGGT GCGCATCATG
TTGCTGGTAA TTCTCGCCTG TTTGCTTTTT TATATGTGGC GAATTCCGGT GATTGATGAA
AAGCAAGAAA AGCACTGA
 
Protein sequence
MQRIILIIIG WLAVVLGTLG VVLPVLPTTP FILLAAWCFA RSSPRFHAWL LYRSWFGSYL 
RFWQKHHAMP RGVKPRAILL ILLTFAISLW FVQMPWVRIM LLVILACLLF YMWRIPVIDE
KQEKH