Gene EcSMS35_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0507 
SymbolacrR 
ID6146028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp514074 
End bp514721 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content46% 
IMG OID641615401 
ProductDNA-binding transcriptional repressor AcrR 
Protein accessionYP_001742608 
Protein GI170681180 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.480121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAA AAACCAAACA AGAAGCGCAA GAAACGCGCC AACACATCCT CGATGTGGCT 
CTACGTCTTT TCTCACAGCA GGGGGTATCA TCCACCTCGC TGGGCGAGAT TGCAAAAGCA
GCTGGCGTTA CGCGCGGTGC AATCTACTGG CATTTTAAAG ACAAGTCGGA TTTGTTCAGT
GAGATCTGGG AACTGTCAGA ATCCAATATT GGTGAACTAG AGCTTGAGTA TCAGGCAAAA
TTCCCTGGCG ATCCACTCTC AGTATTAAGA GAGATATTAA TTCATGTTCT TGAATCCACG
GTGACAGAAG AACGGCGTCG ATTATTGATG GAGATTATAT TCCACAAATG CGAATTTGTC
GGAGAAATGG CTGTTGTGCA ACAGGCACAA CGTAATCTCT GTCTGGAAAG TTATGACCGT
ATAGAACAAA CGTTAAAACA TTGTATTGAA GCGAAAATGT TGCCTGCGGA TTTAATGACG
CGTCGCGCAG CAATTATTAT GCGCGGCTAT ATTTCCGGCC TGATGGAAAA CTGGCTCTTT
GCCCCGCAAT CTTTTGATCT TAAAAAAGAA GCCCGCGATT ACGTCGCCAT CTTACTGGAG
ATGTATCTCC TGTGCCCCAC GCTTCGTAAT CCTGCCACTA ACGAATAA
 
Protein sequence
MARKTKQEAQ ETRQHILDVA LRLFSQQGVS STSLGEIAKA AGVTRGAIYW HFKDKSDLFS 
EIWELSESNI GELELEYQAK FPGDPLSVLR EILIHVLEST VTEERRRLLM EIIFHKCEFV
GEMAVVQQAQ RNLCLESYDR IEQTLKHCIE AKMLPADLMT RRAAIIMRGY ISGLMENWLF
APQSFDLKKE ARDYVAILLE MYLLCPTLRN PATNE