| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0472 |
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| Symbol | cyoA |
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| ID | 6142834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 478965 |
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| End bp | 479912 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641615366 |
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| Product | cytochrome o ubiquinol oxidase subunit II |
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| Protein accession | YP_001742573 |
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| Protein GI | 170683800 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | [TIGR01433] cytochrome o ubiquinol oxidase subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000304701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACTCA GGAAATACAA TAAAAGTTTG GGATGGTTGT CATTATTTGC AGGCACTGTA
TTGCTCAGTG GCTGTAATTC TGCGCTGTTA GATCCCAAAG GACAGATTGG TCTGGAGCAA
CGTTCACTGA TACTGACGGC ATTTGGCCTG ATGTTGATTG TCGTTATTCC CGCAATCTTG
ATGGCTGTTG GTTTCGCCTG GAAGTACCGT GCGAGCAATA AAGATGCTAA GTACAGCCCG
AACTGGTCAC ACTCCAATAA AGTGGAAGCT GTGGTCTGGA CGGTACCTAT CTTAATCATC
ATCTTCCTTG CGGTACTGAC CTGGAAAACC ACTCACGCTC TTGAGCCTAG CAAGCCGCTG
GCACACGACG AGAAGCCCAT TACCATCGAA GTGGTTTCCA TGGACTGGAA ATGGTTCTTC
ATCTACCCGG AACAGGGCAT TGCTACCGTG AATGAAATCG CTTTCCCGGC GAACACTCCG
GTGTACTTCA AAGTGACCTC CAACTCCGTG ATGAACTCCT TCTTCATTCC GCGTCTGGGT
AGCCAGATTT ATGCCATGGC CGGTATGCAG ACTCGCCTGC ATCTGATCGC CAACGAACCC
GGTACTTATG ACGGTATCTC CGCCAGCTAC AGCGGCCCGG GCTTCTCAGG CATGAAGTTC
AAAGCTATTG CAACACCGGA TCGCGCCGCA TTCGACCAAT GGGTCGCAAA AGCGAAACAG
TCGCCGAACA CCATGTCTGA CATGGCAGCG TTCGAAAAAC TGGCCGCGCC TAGCGAATAC
AACCAGGTGG AATATTTCTC CAACGTGAAA CCAGACTTGT TTGCTGATGT GATTAACAAG
TTTATGGCTC ACGGTAAGAG CATGGACATG ACCCAGCCAG AAGGTGAGCA CAGTGCACAC
GAAGGTATGG AAGGCATGGA CATGAGCCAC GCGGAATCCG CCCATTAA
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| Protein sequence | MRLRKYNKSL GWLSLFAGTV LLSGCNSALL DPKGQIGLEQ RSLILTAFGL MLIVVIPAIL
MAVGFAWKYR ASNKDAKYSP NWSHSNKVEA VVWTVPILII IFLAVLTWKT THALEPSKPL
AHDEKPITIE VVSMDWKWFF IYPEQGIATV NEIAFPANTP VYFKVTSNSV MNSFFIPRLG
SQIYAMAGMQ TRLHLIANEP GTYDGISASY SGPGFSGMKF KAIATPDRAA FDQWVAKAKQ
SPNTMSDMAA FEKLAAPSEY NQVEYFSNVK PDLFADVINK FMAHGKSMDM TQPEGEHSAH
EGMEGMDMSH AESAH
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