Gene EcSMS35_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0439 
SymbolyajC 
ID6144445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp451209 
End bp451541 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content50% 
IMG OID641615335 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001742542 
Protein GI170683289 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT TTATTTCTGA TGCGGTAGCG GCAACGGGTG CACCGGCGCA AGGTAGCCCG 
ATGTCTTTGA TTTTGATGCT GGTGGTATTC GGTCTGATTT TCTATTTCAT GATCCTGCGT
CCACAGCAGA AGCGCACCAA AGAACACAAA AAGCTGATGG ACTCCATTGC CAAAGGTGAT
GAAGTTCTGA CGAACGGTGG CCTGGTTGGT CGCGTAACCA AAGTAGCGGA AAACGGCTAC
ATTGCTATCG CGCTGAATGA CACCACTGAA GTAGTTATTA AACGTGACTT CGTAGCTGCC
GTCCTGCCGA AAGGCACCAT GAAGGCGCTG TAA
 
Protein sequence
MSFFISDAVA ATGAPAQGSP MSLILMLVVF GLIFYFMILR PQQKRTKEHK KLMDSIAKGD 
EVLTNGGLVG RVTKVAENGY IAIALNDTTE VVIKRDFVAA VLPKGTMKAL