| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0432 |
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| Symbol | brnQ |
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| ID | 6144246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 441866 |
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| End bp | 443185 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641615328 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_001742535 |
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| Protein GI | 170680091 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.922576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC AATTAAGATC GCGCGATATC ATCGCTCTGG GCTTTATGAC ATTTGCGTTG
TTCGTCGGCG CAGGTAACAT TATTTTCCCT CCAATGGTCG GCTTGCAGGC AGGCGAACAC
GTCTGGACTG CGGCATTCGG TTTCCTCATT ACTGCCGTTG GCCTACCGGT GTTAACGGTG
GTGGCGCTGG CGAAAGTTGG CGGCGGTGTT GACAGCCTCA GCACGCCAAT CGGTAAAGTC
GCTGGCGTAC TGCTGGCAAC GGTGTGTTAC CTGGCGGTGG GGCCGCTTTT CGCTACGCCG
CGTACAGCTA CCGTTTCTTT TGAAGTGGGC ATTGCGCCGC TGACGGGTGA TTCCGCGTTG
CCGCTGTTTA TCTACAGCCT GGTTTATTTC GCTATCGTTA TTCTGGTTTC GCTCTATCCG
GGCAAGCTGC TGGATACCGT GGGCAACTTC CTTGCGCCGC TGAAAATTAT CGCGCTGGTC
ATCCTGTCTG TTGCCGCAAT TATCTGGCCG GCGGGTTCTA TCAGCACGGC GACTGAGGCT
TATCAAAACG CTGCGTTTTC TAACGGCTTC GTCAACGGCT ATCTGACCAT GGATACGCTG
GGCGCAATGG TGTTTGGTAT CGTTATTGTT AACGCGGCGC GTTCTCGTGG CGTTACCGAA
GCGCGTCTGC TGACCCGTTA TACCGTCTGG GCTGGCCTGA TGGCGGGTGT TGGTCTGACT
CTGCTGTATC TGGCGCTGTT CCGTCTGGGT TCAGACAGCG CGTCGCTGGT CGATCAGTCT
GCAAACGGTG CGGCGATCCT GCATGCTTAC GTTCAGCATA CCTTTGGCGG CGGCGGTAGC
TTCCTGCTGG CGGCGTTAAT CTTCATCGCC TGCCTGGTCA CGGCGGTTGG CCTGACCTGT
GCTTGTGCAG AATTCTTCGC CCAGTACGTA CCGCTCTCTT ATCGTACGCT GGTGTTTATC
CTCGGCGGCT TCTCGATGGT GGTGTCTAAC CTCGGCTTGA GCCAGCTGAT TCAGATCTCT
GTACCGGTGT TGACCGCCAT TTATCCGCCG TGTATCGCAC TGGTTGTATT AAGTTTTACA
CGCTCATGGT GGCATAATTC GTCCCGCGTG ATTGCTCCGC CGATGTTTAT CAGCCTGCTT
TTTGGTATTC TCGACGGGAT CAAGGCATCT GCATTCAGCG ATATCTTACC GTCCTGGGCG
CAGCGTTTAC CGCTGGCCGA ACAAGGTCTG GCGTGGTTAA TGCCAACAGT GGTGATGGTG
GTTCTGGCCA TTATCTGGGA TCGTGCGGCA GGTCGTCAGG TGACCTCCAG CGCTCACTAA
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| Protein sequence | MTHQLRSRDI IALGFMTFAL FVGAGNIIFP PMVGLQAGEH VWTAAFGFLI TAVGLPVLTV
VALAKVGGGV DSLSTPIGKV AGVLLATVCY LAVGPLFATP RTATVSFEVG IAPLTGDSAL
PLFIYSLVYF AIVILVSLYP GKLLDTVGNF LAPLKIIALV ILSVAAIIWP AGSISTATEA
YQNAAFSNGF VNGYLTMDTL GAMVFGIVIV NAARSRGVTE ARLLTRYTVW AGLMAGVGLT
LLYLALFRLG SDSASLVDQS ANGAAILHAY VQHTFGGGGS FLLAALIFIA CLVTAVGLTC
ACAEFFAQYV PLSYRTLVFI LGGFSMVVSN LGLSQLIQIS VPVLTAIYPP CIALVVLSFT
RSWWHNSSRV IAPPMFISLL FGILDGIKAS AFSDILPSWA QRLPLAEQGL AWLMPTVVMV
VLAIIWDRAA GRQVTSSAH
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