Gene EcSMS35_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0418 
SymbolaroL 
ID6146269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp428791 
End bp429315 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content53% 
IMG OID641615314 
Productshikimate kinase II 
Protein accessionYP_001742521 
Protein GI170683799 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC CTCTTTTTCT GATCGGGCCT CGGGGCTGTG GTAAAACAAC GGTCGGAATG 
GCCCTTGCCG ATTCGCTTAA CCGTCGATTT GTCGATACCG ACCAGTGGTT GCAATCACAG
CTCAATATGA CGGTCGCGGA GATCGTCGAA AGGGAAGAGT GGGCGGGATT CCGCGCCAGA
GAAACGGCGG CGTTGGAAGC GGTAACTGCG CCATCCACCG TTATCGCCAC GGGCGGCGGC
ATTATCCTGA CGGAATTTAA TCGTCACTTT ATGCAAAATA ACGGGATCGT GGTTTATTTG
TGTGCGCCAG TATCAGTCCT GGTTAACCGA CTGCAAGCTG CACCGGAAGA AGATTTACGG
CCAACCTTAA CGGGGAAACC GCTGAGCGAA GAAGTTCAGG AAGTGCTGGA AGAACGCGAT
GCGCTATATC GCGAAGTTGC GCATATTATC ATCGACGCAA CAAACGAACC CAGCCAGGTG
ATTTCTGAAA TTCGCAGCGC CCTGGCACAG ACGATCAATT GTTGA
 
Protein sequence
MTQPLFLIGP RGCGKTTVGM ALADSLNRRF VDTDQWLQSQ LNMTVAEIVE REEWAGFRAR 
ETAALEAVTA PSTVIATGGG IILTEFNRHF MQNNGIVVYL CAPVSVLVNR LQAAPEEDLR
PTLTGKPLSE EVQEVLEERD ALYREVAHII IDATNEPSQV ISEIRSALAQ TINC