Gene EcSMS35_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0407 
Symbol 
ID6145805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp420260 
End bp421354 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content54% 
IMG OID641615303 
Productputative lipoprotein 
Protein accessionYP_001742510 
Protein GI170682252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCG TCAATCATCT ATCTTCGCTG TCATTGTTGG CGGTTCTGGT TTTAGCGGGG 
TGTAGTAGTC AGGCTCCGCA ACCGTTGAAA AAGGGCGAAA AAGCGATAGA TGTGGCGAGC
GTCGTGCGGC AGAAGATGCC TGCGAGCGTG AAAGACCGCG ATGCCTGGGC GAAAGATCTC
GCCACCACGT TTGAAAGTCA GGGGCTGGCA CCGACGCTGG AAAACGTCTG CTCGGTGCTG
GCGGTGGCGC AGCAGGAGTC AAATTATCAG GCAGATCCGG CCGTTCCGGG CTTAAGCAAG
ATCGCCTGGC AAGAGATTGA CCGTCGTGCT GAACGGATGC ACATTCCTGC TTTTCTGGTG
CATACCGCGC TAAAAATCAA ATCGCCAAAC GGCAAAAGCT ATAGCGAACG GTTAGATTCG
GTGCGTACTG AAAAGCAATT GAGCGCGATT TTTGACGATC TGATCAGCAT GGTGCCAATG
GGGCAGACGT TGTTTGGTTC GCTTAATCCG GTGCGCACCG GTGGGCCGAT GCAGGTCAGC
ATTGCCTTTG CCGAACAGCA TACCAAAGGG TATCCGTGGA AAATGGACGG TACAGTCCGT
CAGGAAGTCT TCAGTCGTCG CGGCGGGTTG TGGTTTGGTA CTTACCATTT ACTGAATTAT
CCCGCCAGCT ATAGCGCGCC GATATACCGT TTTGCTGATT TTAACGCTGG CTGGTACGCC
AGCCGTAATG CCGCGTTTCA GAACGCGGTC AGTAAGGTCA GCGGCGTGAA GCTGGCACTG
GACGGTGATT TAATTCGTTA CGACAGTAAA GAGCCCGGGA AAACCGAACT GGCAACGCGC
AAACTGGCGG GAAAACTGGG GATGAGCGAC AGTGAAATTC GCCGCCAGTT AGAGAAAGGG
GACAGCTTCT CTTTTGAGGA GACGGCGCTG TACAAGAAAG TTTATCAACT TGCCGAAGCG
AAAACGGGTA AATCACTACC CCGCGAAATG TTGCCTGGCA TTCAACTGGA AAGCCCGAAA
ATCACCCGCA ACCTGACTAC GGCCTGGTTT GCGAAGCGCG TAGACGAACG GCGGGCGCGT
TGTATGAAAC AGTGA
 
Protein sequence
MSRVNHLSSL SLLAVLVLAG CSSQAPQPLK KGEKAIDVAS VVRQKMPASV KDRDAWAKDL 
ATTFESQGLA PTLENVCSVL AVAQQESNYQ ADPAVPGLSK IAWQEIDRRA ERMHIPAFLV
HTALKIKSPN GKSYSERLDS VRTEKQLSAI FDDLISMVPM GQTLFGSLNP VRTGGPMQVS
IAFAEQHTKG YPWKMDGTVR QEVFSRRGGL WFGTYHLLNY PASYSAPIYR FADFNAGWYA
SRNAAFQNAV SKVSGVKLAL DGDLIRYDSK EPGKTELATR KLAGKLGMSD SEIRRQLEKG
DSFSFEETAL YKKVYQLAEA KTGKSLPREM LPGIQLESPK ITRNLTTAWF AKRVDERRAR
CMKQ