Gene EcSMS35_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0396 
SymboltauC 
ID6144014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp409348 
End bp410175 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID641615292 
Producttaurine transporter subunit 
Protein accessionYP_001742499 
Protein GI170683056 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGC TCATTAATGA AAAACTGCAT TCGCATCGGC TGAAATGGCG CTGGCCGCTC 
TCGCGTCAGG TGACCTTAAG CATTGGTACG TTAGCGGTTT TGCTCACTGT ATGGTGGGCA
GTCGCGGCGC TGCAACTGAT TAGCCCGCTG TTTTTGCCGC CACCGCAACA GGTACTGGCA
AAACTGCTCA CCATTGCCGG ACCGCAGGGA TTTATGGACG CCACGCTGTG GCAGCATCTG
GCAGCCAGCC TGACGCGCAT TTTGCTGGCG CTACTCGCGG CGGTGTTGAT CGGCATTCCG
GTCGGGATCG CCATGGGACT AAGCCCGACG GTGCGCGGCA TTCTGGATCC GATAATCGAG
CTTTATCGTC CGGTGCCGCC GCTGGCTTAT TTGCCGCTGA TGGTGATCTG GTTTGGTATT
GGTGAAACTT CGAAGATCTT ACTGATCTAT TTAGCGATTT TTGCCCCGGT AGCGATGTCG
GCGCTGGCGG GGGTGAAAAG CGCGCAGCAG GTTCGCATTC GTGCCGCCCA GTCGCTGGGT
GCCAGCCGTG CGCAGGTGCT GTGGTTTGTC ATTTTGCCCG GCGCGCTGCC GGAAATCCTC
ACCGGATTAC GCATTGGTCT GGGTGTGGGC TGGTCTACGC TGGTAGCGGC GGAGCTGATT
GCCGCGACGC GCGGTTTAGG ATTTATGGTT CAGTCAGCGG GTGAATTTCT CGCGACTGAC
GTGGTGCTGG CGGGGATCGC GGTGATTGCG ATTATCGCCT TTCTTTTAGA ACTGGGTTTG
CGCGCGTTAC AGCGCCGTCT GACGCCCTGG CATGGAGAAG TACAATGA
 
Protein sequence
MSVLINEKLH SHRLKWRWPL SRQVTLSIGT LAVLLTVWWA VAALQLISPL FLPPPQQVLA 
KLLTIAGPQG FMDATLWQHL AASLTRILLA LLAAVLIGIP VGIAMGLSPT VRGILDPIIE
LYRPVPPLAY LPLMVIWFGI GETSKILLIY LAIFAPVAMS ALAGVKSAQQ VRIRAAQSLG
ASRAQVLWFV ILPGALPEIL TGLRIGLGVG WSTLVAAELI AATRGLGFMV QSAGEFLATD
VVLAGIAVIA IIAFLLELGL RALQRRLTPW HGEVQ