Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0373 |
Symbol | lacA |
ID | 6143596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 385467 |
End bp | 386087 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641615269 |
Product | galactoside O-acetyltransferase |
Protein accession | YP_001742476 |
Protein GI | 170682300 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.212634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCAA TGAACATGCC AATGACCGAA AGAATAAAAG CAGGCAAGCT ATTTACCGAT ATGTGCGAAG GCTTACCGGA AAAAAGACTT CGTGGGAAAA CGTTAATGTA TGAGTTTAAT CACTCGCATC CATCAGAAGT TGAAAAAAGA GAAAGCCTGA TTAAAGAAAT GTTTGCCACG GTAGGGGAAA ACGCCTGGAT AGAACCACCC GTCTATTTCT CTTACGGTTC CAACATCCAT ATAGGCCGCA ATTTTTATGC AAATTTCAAT TTAACCATTG TAGACGACTA CACGGTAACG ATCGGTGATA ACGTATTGAT TGCACCCAAT GTTACTCTTT CCGTTACGGG ACACCCTGTA CACCATGAAT TGAGAAAAAA CGGTGAGATG TACTCTTTTC CGATAACGAT TGGCAATAAC GTCTGGATCG GAAGTCATGT GGTCATTAAT CCAGGCGTCA CCATCGGGGA TAATTCTGTT ATTGGCGCGG GTAGTGTCGT CATAAAAGAC ATTCCACCAA ACGTCGTGGC TGCTGGCGTT CCTTGCCGGG TTATTCGCGA AATAAACGAG CGGGATAAGC ACTATTATTA CAAAGATTAT AAAGTTGAAC CTTCAGTTTA A
|
Protein sequence | MIAMNMPMTE RIKAGKLFTD MCEGLPEKRL RGKTLMYEFN HSHPSEVEKR ESLIKEMFAT VGENAWIEPP VYFSYGSNIH IGRNFYANFN LTIVDDYTVT IGDNVLIAPN VTLSVTGHPV HHELRKNGEM YSFPITIGNN VWIGSHVVIN PGVTIGDNSV IGAGSVVIKD IPPNVVAAGV PCRVIREINE RDKHYYYKDY KVEPSV
|
| |