Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0347 |
Symbol | |
ID | 6143816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 358748 |
End bp | 359680 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641615243 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001742451 |
Protein GI | 170683566 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAA TTTTTACCGA AGAGAATCTG TTGGCATTTA CTACCGCTGC GCGTTTTGGC AGTTTCAGTA AAGCAGCAGA AGAGTTGGGT TTAACCACTT CCGCCATTAG CTACACCATC AAGCGAATGG AAACAGGGCT GGATGTGGTG CTGTTCACTC GCAGTACCCG AAGCATTGAG TTAACGGAGT CCGGGCGTTA TTTTTTCCGC AAAGCTACCG ACCTGCTGAA TGATTTTCAC GCCATCAAAC GCAGCATCGA TACTATTTCG CAGGGTATAG AAGCACGGGT GCGCATTTGT ATTAACCAAC TGCTTTATAC GCCCAAACAC ACCGCACGCT TATTACAGGT ACTGAAAAAG CAGTTTCCAA CCTGCCAGAT TACCGTGACG ACCGAAGTGT ATAACGGCGT CTGGGATGCG ATTATTAATA ATCAGGCGAA TATTGCTATC GGCGCGCCCG ACACACTGCT GGACGGCGGC GGCATTGATT ACACGGAGAT TGGCGCGATT CGCTGGGCTT TTGCTATCGC CCCGGATCAC CCGTTAGCCT TTGTGCCGGA ACCCATCGCC GAAAGCCAGC TGCGTCTCTA TCCTAATATC ATGGTGGAAG ACACCGCGCA TACGATTAAT AAAAAAGTGG GCTGGTTGCT GCATGGGCAG GAGTCGATTC TGGTGCCAGA TTTCAACACC AAATGTCAGT GCCAGATTTT AGGTGAAGGA ATTGGTTTTT TGCCGGATTA CATGGTCCGT GAGGCGATGG CGCAATCCCT GCTGGTTACC CGACAAATCC ATAATCCGCG CCAGGATTCA CGCATGTTAC TCGCAACTCA GCATTCTGCT ACGGGTCAGG TGACGCAGTG GATTAAAAAG CAATTTGCGC CAAATGGCAT ATTAACGGGG ATCTATCAGG ATTTACTGCA TCGGGAGAAT TAA
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Protein sequence | MNSIFTEENL LAFTTAARFG SFSKAAEELG LTTSAISYTI KRMETGLDVV LFTRSTRSIE LTESGRYFFR KATDLLNDFH AIKRSIDTIS QGIEARVRIC INQLLYTPKH TARLLQVLKK QFPTCQITVT TEVYNGVWDA IINNQANIAI GAPDTLLDGG GIDYTEIGAI RWAFAIAPDH PLAFVPEPIA ESQLRLYPNI MVEDTAHTIN KKVGWLLHGQ ESILVPDFNT KCQCQILGEG IGFLPDYMVR EAMAQSLLVT RQIHNPRQDS RMLLATQHSA TGQVTQWIKK QFAPNGILTG IYQDLLHREN
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