Gene EcSMS35_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0347 
Symbol 
ID6143816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp358748 
End bp359680 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content49% 
IMG OID641615243 
ProductLysR family transcriptional regulator 
Protein accessionYP_001742451 
Protein GI170683566 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAA TTTTTACCGA AGAGAATCTG TTGGCATTTA CTACCGCTGC GCGTTTTGGC 
AGTTTCAGTA AAGCAGCAGA AGAGTTGGGT TTAACCACTT CCGCCATTAG CTACACCATC
AAGCGAATGG AAACAGGGCT GGATGTGGTG CTGTTCACTC GCAGTACCCG AAGCATTGAG
TTAACGGAGT CCGGGCGTTA TTTTTTCCGC AAAGCTACCG ACCTGCTGAA TGATTTTCAC
GCCATCAAAC GCAGCATCGA TACTATTTCG CAGGGTATAG AAGCACGGGT GCGCATTTGT
ATTAACCAAC TGCTTTATAC GCCCAAACAC ACCGCACGCT TATTACAGGT ACTGAAAAAG
CAGTTTCCAA CCTGCCAGAT TACCGTGACG ACCGAAGTGT ATAACGGCGT CTGGGATGCG
ATTATTAATA ATCAGGCGAA TATTGCTATC GGCGCGCCCG ACACACTGCT GGACGGCGGC
GGCATTGATT ACACGGAGAT TGGCGCGATT CGCTGGGCTT TTGCTATCGC CCCGGATCAC
CCGTTAGCCT TTGTGCCGGA ACCCATCGCC GAAAGCCAGC TGCGTCTCTA TCCTAATATC
ATGGTGGAAG ACACCGCGCA TACGATTAAT AAAAAAGTGG GCTGGTTGCT GCATGGGCAG
GAGTCGATTC TGGTGCCAGA TTTCAACACC AAATGTCAGT GCCAGATTTT AGGTGAAGGA
ATTGGTTTTT TGCCGGATTA CATGGTCCGT GAGGCGATGG CGCAATCCCT GCTGGTTACC
CGACAAATCC ATAATCCGCG CCAGGATTCA CGCATGTTAC TCGCAACTCA GCATTCTGCT
ACGGGTCAGG TGACGCAGTG GATTAAAAAG CAATTTGCGC CAAATGGCAT ATTAACGGGG
ATCTATCAGG ATTTACTGCA TCGGGAGAAT TAA
 
Protein sequence
MNSIFTEENL LAFTTAARFG SFSKAAEELG LTTSAISYTI KRMETGLDVV LFTRSTRSIE 
LTESGRYFFR KATDLLNDFH AIKRSIDTIS QGIEARVRIC INQLLYTPKH TARLLQVLKK
QFPTCQITVT TEVYNGVWDA IINNQANIAI GAPDTLLDGG GIDYTEIGAI RWAFAIAPDH
PLAFVPEPIA ESQLRLYPNI MVEDTAHTIN KKVGWLLHGQ ESILVPDFNT KCQCQILGEG
IGFLPDYMVR EAMAQSLLVT RQIHNPRQDS RMLLATQHSA TGQVTQWIKK QFAPNGILTG
IYQDLLHREN