Gene EcSMS35_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0308 
Symbol 
ID6144221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp317136 
End bp317615 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID641615204 
ProductRadC family DNA repair protein 
Protein accessionYP_001742412 
Protein GI170684134 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00747747 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00434898 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACAGT CACTTATCCC ACTGGCTCCG GCATTACCAC TAACCGCACA ACGCACGGTA 
AAACGCGCCT TAACGCTGCT TGACCGACAC CTGCGCGAAA CAGGCGTGGC ATTCACCTCC
ACTCAGGCTG CCCGCGACTG GCTGAAACTG AAAATGGCGG GACTGGAGCG CGAAGAGTTT
ATGGTGCTGT ATCTGAACCA GCAGAACCAG TTGATTGCCC ACGAAACCCT GTTTGCCGGT
TCTATTAGCA GTACCGAGGT ACATCCCCGT GAGGTGGTCA AACGCGCCCT GTACTTCAAT
GCGGCAGCAG TGATACTGGC GCATAACCAT CCCTCCGGAG ACACCTCGCC CAGCAAGGCA
GATAAGACCA TCACGCAGCG TCTGGTGCAG GCGCTTCAGC TCGTTGATAT CCGTGTGCCT
GACCACCTTA TCGTCGGTGG TACGCAGATA TTGTCGTTCG CTGAACACGG TCTGCTTTGA
 
Protein sequence
MEQSLIPLAP ALPLTAQRTV KRALTLLDRH LRETGVAFTS TQAARDWLKL KMAGLEREEF 
MVLYLNQQNQ LIAHETLFAG SISSTEVHPR EVVKRALYFN AAAVILAHNH PSGDTSPSKA
DKTITQRLVQ ALQLVDIRVP DHLIVGGTQI LSFAEHGLL