Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0308 |
Symbol | |
ID | 6144221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 317136 |
End bp | 317615 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641615204 |
Product | RadC family DNA repair protein |
Protein accession | YP_001742412 |
Protein GI | 170684134 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00747747 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00434898 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAACAGT CACTTATCCC ACTGGCTCCG GCATTACCAC TAACCGCACA ACGCACGGTA AAACGCGCCT TAACGCTGCT TGACCGACAC CTGCGCGAAA CAGGCGTGGC ATTCACCTCC ACTCAGGCTG CCCGCGACTG GCTGAAACTG AAAATGGCGG GACTGGAGCG CGAAGAGTTT ATGGTGCTGT ATCTGAACCA GCAGAACCAG TTGATTGCCC ACGAAACCCT GTTTGCCGGT TCTATTAGCA GTACCGAGGT ACATCCCCGT GAGGTGGTCA AACGCGCCCT GTACTTCAAT GCGGCAGCAG TGATACTGGC GCATAACCAT CCCTCCGGAG ACACCTCGCC CAGCAAGGCA GATAAGACCA TCACGCAGCG TCTGGTGCAG GCGCTTCAGC TCGTTGATAT CCGTGTGCCT GACCACCTTA TCGTCGGTGG TACGCAGATA TTGTCGTTCG CTGAACACGG TCTGCTTTGA
|
Protein sequence | MEQSLIPLAP ALPLTAQRTV KRALTLLDRH LRETGVAFTS TQAARDWLKL KMAGLEREEF MVLYLNQQNQ LIAHETLFAG SISSTEVHPR EVVKRALYFN AAAVILAHNH PSGDTSPSKA DKTITQRLVQ ALQLVDIRVP DHLIVGGTQI LSFAEHGLL
|
| |