| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0250 |
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| Symbol | fliF |
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| ID | 6146331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 263135 |
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| End bp | 264781 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641615148 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001742357 |
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| Protein GI | 170682472 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAC AAATAAAGAA GTTAACCCAG GCGTTTCCGG CGTTTCGACT GCGTCTTGCA
GATAACAAAC GCTGGGCATT GATGGCGGGA GTGGGGCTTG CCGTTGCGGC GACGGCAATT
ATCGTCAGCG TACTGTGGAC CGGTAATCGC GGCTACGTCT CGCTCTACGG ACGCCAGGAA
AATCTGCCCG TGTCGCAGAT TGTCACCGTG CTGGACGGCG AAAAGCTCAG CTACCGCATC
GACCCGCAAA GCGGGCAGAT TCTGGTGCCG GAAGATGAAC TGTCGAAAAC GCGTATGACC
CTTGCCGCGA AAGGCGTGCA GGCGATCTTG CCCAGCGGCT ACGAGCTGAT GGACAAAGAC
GAAGTGCTCG GCAGCAGCCA GTTCGTGCAG AACGTGCGCT ACAAACGCAG CCTCGAAGGG
GAGCTGGCGC AGAGCATTAT GTCGCTGGAC GCGGTGGAGA GCGCGCGGGT GCATCTGGCG
CTCAACGAAG AGAGCTCGTT TGTGGTCAGC GATGAGCCGC AAAACAGCGC CTCGGTGGTG
GTGCGTCTGC ATTACGGCGC GAAGCTGAAT ATGGACCAGG TGAACGCCAT TGTGCATCTG
GTTTCCGGCA GCATTCCGGG GCTGCACGCC AGCAAAGTTA GCGTCGTCGA TCAGGCGGGA
AATCTGCTGA CCGACGGCAT TGGCGCGGGC GAAGCGGTTT CAGCCGCTAC CCGTAAACGC
GATCAGATCC TCAAAGATAT TCAGGACAAA ACCCGCGCCA GCGTGGCGAA CGTGCTGGAT
TCGCTGGTCG GCAGCGGGAA TTACCGCGTC AGCGTCATGC CGGATCTCGA CCTCAGTAAT
ATCGATGAAA CTCAGGAACA CTACGGCGAC GCGCCGAAAA TCAACCGCGA AGAAAACGTG
CTGGACAGCG ATACCAATCA GGTGGCGATG GGTGTGCCCG GTTCGCTCAG TAACCGTCCG
CCGATTGCAG CGAATCAGAT GACCAACGGT ACGGAAGAAA ACCGCTCGCC GGAAGCCCTT
TCGAAACACA GCGAAAGCAA GCGCGATTAC TCTTACGACC GCAGCGTCCA GCATATTCAG
CATCCCGGCT TTGCGGTGAA ACGCCTTAAC GTGGCGGTGG TGCTCAATCA AAACGCTCCG
GCGCTGAAAA ACTGGAAGCC GGAGCAGACC ACGCAACTGA CCGCGTTGCT GAACAATGCC
GCCGGGATCG ACGTCCAGCG CGGTGACAAT CTCACCTTAT CGCTGCTTAA CTTTGTGCCG
CAGGCGGTGC CGGTCGAACC AATTATTCCG CTGTGGAAAG ACGACAGCGT GCTGGCCTGG
GTGCGGCTGA TTGGCTGCGG CCTGCTGGCG CTGTTGTTGC TGTTCTTTGT GGTGCGCCCG
GTAATGAAAC GGCTGACGGC GGTACGTGCG CCGGTTATCA CACCAGAACC GGAAGCTGTC
AGCGAACCGT GGATTGCCAT GCCGGAAGAG GAACGCAAAA ACGTCGATCT GCCGTCGCTG
CCCGGCGATG ACAGCCTGCC GTCCCAGAGT TCCGGCCTCG AAGTAAAACT CGAGTTCCTG
CAAAAACTGG CCATGAGCGA CACCGATCGC GTAGCCGAAG TTCTCAGACA ATGGATCACC
AGCAATGAGC GAATTGACAA CAAATAA
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| Protein sequence | MNAQIKKLTQ AFPAFRLRLA DNKRWALMAG VGLAVAATAI IVSVLWTGNR GYVSLYGRQE
NLPVSQIVTV LDGEKLSYRI DPQSGQILVP EDELSKTRMT LAAKGVQAIL PSGYELMDKD
EVLGSSQFVQ NVRYKRSLEG ELAQSIMSLD AVESARVHLA LNEESSFVVS DEPQNSASVV
VRLHYGAKLN MDQVNAIVHL VSGSIPGLHA SKVSVVDQAG NLLTDGIGAG EAVSAATRKR
DQILKDIQDK TRASVANVLD SLVGSGNYRV SVMPDLDLSN IDETQEHYGD APKINREENV
LDSDTNQVAM GVPGSLSNRP PIAANQMTNG TEENRSPEAL SKHSESKRDY SYDRSVQHIQ
HPGFAVKRLN VAVVLNQNAP ALKNWKPEQT TQLTALLNNA AGIDVQRGDN LTLSLLNFVP
QAVPVEPIIP LWKDDSVLAW VRLIGCGLLA LLLLFFVVRP VMKRLTAVRA PVITPEPEAV
SEPWIAMPEE ERKNVDLPSL PGDDSLPSQS SGLEVKLEFL QKLAMSDTDR VAEVLRQWIT
SNERIDNK
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