| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0243 |
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| Symbol | lfiR |
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| ID | 6147296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 258392 |
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| End bp | 259174 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641615141 |
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| Product | lateral flagellar export/assembly protein LfiR |
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| Protein accession | YP_001742350 |
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| Protein GI | 170683764 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCACAA GCGACGTTAC GCAACTGACG GATTTGGCGC TGGGGCTGTG GTTTCCCTTC
GTGCGCATTA TGGCGTTTCT GCGCTATGTG CCGGTGCTGG ATAACAGCGC CCTGACCGTG
CGTGTGCGGA TTATTTTGTC GCTGGCGCTG GCAATCATCA TCACGCCGTT AATTCCGCAT
CCCATTCCCC ACGATCTGCT ATCGCTCAAC AGTCTGATCC TGACGGTGGA GCAAATTTTA
TGGGGCATGT TATTCGGATT GATGTTTCAG TTTCTGTTTC TGGCGCTGCA ACTCGCCGGG
CAAATTCTCT CGTTCAATAT GGGGATGAGC ATGGCGGTGA TGAACGACCC AAGCAGCGGC
GCATCGACCA CCGTGCTGGC GGAGTTAATT AACGTCTATG CGATCCTGCT GTTTTTTGCC
ATGGACGGGC ATCTGCTGCT GGTAAGCGTG CTGTATAAGG GTTTCACCTA CTGGCCGATT
GGCAACGCGC TGCATCCGCA AACCCTGCGC ACCATCGCGC TGGCCTTTAG CTGGGTGCTG
GCGTCCGCAT CACTGCTGGC GCTGCCGACC ACTTTTATCA TGCTGATTGT GCAGGGCTGC
TTTGGCCTGC TTAACCGCAT TGCGCCGCCG CTGAACCTTT TTTCGCTCGG CTTTCCCATC
AACATGCTGG CGGGGCTGGT TTGCTTCGCC ACCCTGCTCT ACAACCTGCC GGATCACTAT
CTGCATCTGG CGAATTTTGT GTTGCAGCAA CTCGACGCGC TGAAAGGTCA CTATGGCGGA
TAG
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| Protein sequence | MRTSDVTQLT DLALGLWFPF VRIMAFLRYV PVLDNSALTV RVRIILSLAL AIIITPLIPH
PIPHDLLSLN SLILTVEQIL WGMLFGLMFQ FLFLALQLAG QILSFNMGMS MAVMNDPSSG
ASTTVLAELI NVYAILLFFA MDGHLLLVSV LYKGFTYWPI GNALHPQTLR TIALAFSWVL
ASASLLALPT TFIMLIVQGC FGLLNRIAPP LNLFSLGFPI NMLAGLVCFA TLLYNLPDHY
LHLANFVLQQ LDALKGHYGG
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