Gene EcSMS35_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0242 
SymbolflhB 
ID6146118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp257263 
End bp258402 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content56% 
IMG OID641615140 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_001742349 
Protein GI170683079 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATA GCAGCAGCGA AGAAAAAACA GAGAAACCCT CGGCGCAAAA GCTGCGTAAA 
GCGCGTGAAG AGGGGCAACT GCCGCGCTCG AAGGATATGG GGCTGGCGGC GAGCCTGTTT
GCGGCGTTTG TGGTGATCTC CAGCAGCTTC CCGTGGTATG CCGATTTTGT GCGTGAGAGT
TTTATCAGCG TGCATCAGTA CGCGCAGGAG ATTAATAACC CGGATGTGAT CGGCCAGTTT
CTGCGCCATC ACCTGTTAAT TCTCGGCAAG TTTATTCTTA CCTTGCTGCC GATGCCCGCC
GCCGCACTGC TCTCCTCGCT GGTGCCTGGC GGCTGGCTGT TTCTGCCGAA AAAAATCCTC
CCTGATTTCA GCAAAATTAG CCCGTTAAAA GGGATTGGGC GACTGTTTTC CAGTGAGCAT
CTGGCGGAAA CGGGAAAGAT GACAGTGAAG TCGGTGGTGG TGCTGGTGAT GCTGTGGGTA
AGCCTGCGCA ATAACTTTGC CGCCTTTCTC GGCCTGCAGG CGCTGCCGTT CAAACTGGCA
ATTAACGATG GTTTATCGCT CTACGCCAGC GTGATGCGCA ACTTTGTCAT CCTGTTTATC
TTCTTTGCGC TTATCGACGT GCCGCTGGCG AAAGCCCTGT TTACCAAAGG GCTGAAGATG
ACCAAGCAGG AGCTGAAAGA AGAGTACAAA AATCAGGAAG GCAAGCCGGA AGTGAAGGCG
CGCGTGCGAC GGCTGCAACG GCAGCTGGCG ATGGGGCAAA TCCGCAAAGT GGTGCCGAAA
GCCAACGTGG TGATCACCAA CCCGACCCAC TACGCCGTGG CGTTGCAGTA TGACCAGTCT
CGCGCCGCCG CGCCGTTTGT GGTGGCAAAA GGCACCGATG AAATCGCCCT CTATATTCGC
CAGGTCGCCG CTGAGAATCA GGTGGAAGTG GTCGAGTTCC CGCGGCTGGC GCGCTCGGTT
TACTACACCA CGCAGGTGAA CCAACAAATT CCGTTTCAGC TTTACCGGGC CATCGCCCAC
GTTCTGACCT ACGTCCTACA AATGAAACAC TGGCGCGAGG GCGCACAGCC GCGCCCGGCC
CTGAACAGAC ATATTTCCAT TCCCAAAGAG GTGCTTAAAC TGGATGGCGA AAACAACTAA
 
Protein sequence
MADSSSEEKT EKPSAQKLRK AREEGQLPRS KDMGLAASLF AAFVVISSSF PWYADFVRES 
FISVHQYAQE INNPDVIGQF LRHHLLILGK FILTLLPMPA AALLSSLVPG GWLFLPKKIL
PDFSKISPLK GIGRLFSSEH LAETGKMTVK SVVVLVMLWV SLRNNFAAFL GLQALPFKLA
INDGLSLYAS VMRNFVILFI FFALIDVPLA KALFTKGLKM TKQELKEEYK NQEGKPEVKA
RVRRLQRQLA MGQIRKVVPK ANVVITNPTH YAVALQYDQS RAAAPFVVAK GTDEIALYIR
QVAAENQVEV VEFPRLARSV YYTTQVNQQI PFQLYRAIAH VLTYVLQMKH WREGAQPRPA
LNRHISIPKE VLKLDGENN