| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0241 |
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| Symbol | lfhA |
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| ID | 6147287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 255186 |
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| End bp | 257279 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641615139 |
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| Product | lateral flagellar export/assembly protein LfhA |
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| Protein accession | YP_001742348 |
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| Protein GI | 170681922 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAA CAACTAAATC GTTCCTCGCG CTGCTGCGCG GCGGCAATCT CGGCGTGCCG
CTGGTAATAC TGTGTATTCT GGCGATGGTT ATTCTGCCGC TGCCGCCTGC GCTGCTGGAT
ATTCTGTTCA CCTTCAACAT TGTGCTGGCG GTGATGGTGC TGCTGGTGGC GGTGTCGGCG
AAAAGGCCGC TGGAATTCAG CCTGTTCCCG ACCATTTTGC TGATCACCAC TTTAATGCGC
CTGACGCTCA ACGTCGCCTC CACGCGCGTG GTGCTGTTAC ACGGGCATCT CGGCGCGGGC
GCGGCGGGTA AGGTAATTGA GTCGTTTGGT CAGGTGGTGA TTGGCGGCAA CTTTGTCGTC
GGTTTCGTGG TGTTTATCAT CCTGATGATC ATCAACTTTA TCGTCGTCAC CAAAGGGGCC
GAGCGTATTT CCGAGGTTTC TGCCCGCTTT ACCCTGGACG CGATGCCCGG TAAACAGATG
GCGATTGACG CCGATCTTAA CGCCGGATTG ATCAACCAGG CGCAGGCACA AACCCGGCGT
AAAGATGTTG CCAGCGAGGC CGATTTCTAC GGCGCAATGG ACGGGGCATC GAAGTTTGTG
CGCGGCGATG CCATCGCCGG GATGATGATT CTGGCGATCA ACCTGATCGG CGGCGTCTGT
ATCGGGATCT TCAAATACAA CCTGAGCGCC GACGCCGCCT TCCAGCAATA TGTGCTGATG
ACTATCGGCG ACGGGCTGGT GGCGCAGATC CCGTCCCTGC TGCTCTCCAC CGCGGCGGCA
ATTATCGTCA CCCGCGTCAG CGACAACGGC GATATCGCCC ATGACGTGCG CCACCAGCTG
CTGGCAAGTC CGTCGGTGCT CTACACCGCC ACCGGGATCA TGTTTGTGCT GGCGGTGGTG
CCGGGGATGC CGCATCTGCC ATTTTTGCTG TTCAGCGCCC TGCTTGGCTT TACCGGCTGG
CGGATGAGCA AACGCCCGCA GGCGGCGGAG GCGGAGGAGA AAAGCCTCGA AACGCTGACC
CGAACCATCA CCGAAACCAG CGAGCAACAG GTCAGTTGGG AAACCATTCC GCTGATCGAG
CCCATCAGCT TAAGCCTCGG CTACAAGCTG GTGGCGCTGG TGGACAAAGC GCAGGGGAAC
CCGCTCACCC AGCGGATTCG CGGCGTGCGG CAGGTGATAT CCGACGGTAA CGGCGTGCTG
CTGCCGGAGA TCCGTATTCG GGAAAACTTC CGTCTCAAGC CCAGCCAGTA CGCCATTTTC
ATCAACGGCA TTAAGGCTGA TGAAGCGGAT ATTCCGGCGG ATAAACTGAT GGCCCTGCCC
TCCAGCGAAA CCTACGGCGA GATTGACGGC GTACTGGGGA ATGACCCGGC ATATGGGATG
CCGGTCACCT GGATTCAGCC TGCGCAGAAA GCGAAGGCGC TGAATATGGG GTATCAGGTG
ATCGACAGCG CCAGCGTGAT TGCTACCCAT GTAAATAAGA TTGTGCGCAG CTATATTCCT
GATTTATTTA ACTATGACGA TATTACGCAG TTGCATAATC GTTTGTCGTC GATGGCACCG
CGACTGGCGG AAGACTTAAG CGCGGCGCTC AATTACAGCC AGTTGCTGAA AGTGTATCGC
GCGCTGCTGA CCGAAGGCGT TTCCCTGCGC GATATCGTCA CCATCGCCAC CGTGCTGGTC
GCCAGTAGTG CGGTGACTAA AGATCATATC CTGCTGGCGG CCGATGTGCG CCTGGCGCTG
CGGCGCAGTA TCACCCATCC GTTCGTTCGC AAGCAGGAGC TGACGGTGTA TACGCTGAAT
AATGAGCTGG AAAATCTGCT GACCAACGTG GTGAATCAGG CGCAACAGGC CGGCAAAGTG
ATGCTCGACA GCGTGCCGGT GGACCCGAAT ATGCTTAACC AGTTCCAGAA CACGATGCCG
CAAGTGAAGG AGCAGATGAA AGCGGCGGGG AAAGACCCTG TGCTGCTGGT GCCACCGCAG
TTGCGCCCTT TGCTGGCGCG CTATGCGAGA TTGTTTGCGC CGGGGCTGCA TGTGCTGTCG
TATAACGAAG TGCCGGACGA GCTGGAGTTG AAGATTATGG GGGCGTTGAT GTAG
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| Protein sequence | MAKTTKSFLA LLRGGNLGVP LVILCILAMV ILPLPPALLD ILFTFNIVLA VMVLLVAVSA
KRPLEFSLFP TILLITTLMR LTLNVASTRV VLLHGHLGAG AAGKVIESFG QVVIGGNFVV
GFVVFIILMI INFIVVTKGA ERISEVSARF TLDAMPGKQM AIDADLNAGL INQAQAQTRR
KDVASEADFY GAMDGASKFV RGDAIAGMMI LAINLIGGVC IGIFKYNLSA DAAFQQYVLM
TIGDGLVAQI PSLLLSTAAA IIVTRVSDNG DIAHDVRHQL LASPSVLYTA TGIMFVLAVV
PGMPHLPFLL FSALLGFTGW RMSKRPQAAE AEEKSLETLT RTITETSEQQ VSWETIPLIE
PISLSLGYKL VALVDKAQGN PLTQRIRGVR QVISDGNGVL LPEIRIRENF RLKPSQYAIF
INGIKADEAD IPADKLMALP SSETYGEIDG VLGNDPAYGM PVTWIQPAQK AKALNMGYQV
IDSASVIATH VNKIVRSYIP DLFNYDDITQ LHNRLSSMAP RLAEDLSAAL NYSQLLKVYR
ALLTEGVSLR DIVTIATVLV ASSAVTKDHI LLAADVRLAL RRSITHPFVR KQELTVYTLN
NELENLLTNV VNQAQQAGKV MLDSVPVDPN MLNQFQNTMP QVKEQMKAAG KDPVLLVPPQ
LRPLLARYAR LFAPGLHVLS YNEVPDELEL KIMGALM
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