Gene EcSMS35_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0227 
SymbolrnhA 
ID6145015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp244879 
End bp245346 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content50% 
IMG OID641615127 
Productribonuclease H 
Protein accessionYP_001742337 
Protein GI170682534 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0209104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC AGGTAGAAAT TTTCACCGAC GGTTCGTGTC TGGGTAATCC AGGACCGGGG 
GGATACGGTG CTATTTTACG CTATCGCGGA CGCGAGAAAA CCTTTAGCGC AGGCTACACC
CGCACCACCA ACAACCGTAT GGAGTTGATG GCCGCTATTG TCGCGCTGGA GGCGTTAAAA
GAACATTGCG AAGTTATTTT GAGTACCGAC AGCCAGTATG TCCGCCAGGG TATCACCCAG
TGGATCCATA ACTGGAAAAA ACGTGGCTGG AAAACAGCAG ACAAAAAACC AGTAAAAAAT
GTCGATCTCT GGCAACGTCT TGATGCTGCG CTGGGGCAGC ATCAAATCAA ATGGGAATGG
GTTAAAGGCC ATGCCGGTCA TCCAGAAAAC GAACGTTGCG ATGAACTGGC TCGTGCCGCA
GCGATGAATC CCACACTGGA AGATACGGGC TATCAAGTCG AAGTTTAA
 
Protein sequence
MLKQVEIFTD GSCLGNPGPG GYGAILRYRG REKTFSAGYT RTTNNRMELM AAIVALEALK 
EHCEVILSTD SQYVRQGITQ WIHNWKKRGW KTADKKPVKN VDLWQRLDAA LGQHQIKWEW
VKGHAGHPEN ERCDELARAA AMNPTLEDTG YQVEV