Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0227 |
Symbol | rnhA |
ID | 6145015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 244879 |
End bp | 245346 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641615127 |
Product | ribonuclease H |
Protein accession | YP_001742337 |
Protein GI | 170682534 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0209104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAAAC AGGTAGAAAT TTTCACCGAC GGTTCGTGTC TGGGTAATCC AGGACCGGGG GGATACGGTG CTATTTTACG CTATCGCGGA CGCGAGAAAA CCTTTAGCGC AGGCTACACC CGCACCACCA ACAACCGTAT GGAGTTGATG GCCGCTATTG TCGCGCTGGA GGCGTTAAAA GAACATTGCG AAGTTATTTT GAGTACCGAC AGCCAGTATG TCCGCCAGGG TATCACCCAG TGGATCCATA ACTGGAAAAA ACGTGGCTGG AAAACAGCAG ACAAAAAACC AGTAAAAAAT GTCGATCTCT GGCAACGTCT TGATGCTGCG CTGGGGCAGC ATCAAATCAA ATGGGAATGG GTTAAAGGCC ATGCCGGTCA TCCAGAAAAC GAACGTTGCG ATGAACTGGC TCGTGCCGCA GCGATGAATC CCACACTGGA AGATACGGGC TATCAAGTCG AAGTTTAA
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Protein sequence | MLKQVEIFTD GSCLGNPGPG GYGAILRYRG REKTFSAGYT RTTNNRMELM AAIVALEALK EHCEVILSTD SQYVRQGITQ WIHNWKKRGW KTADKKPVKN VDLWQRLDAA LGQHQIKWEW VKGHAGHPEN ERCDELARAA AMNPTLEDTG YQVEV
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