| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0180 |
|---|
| Symbol | rpsB |
|---|
| ID | 6143613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 199321 |
|---|
| End bp | 200046 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641615080 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_001742296 |
|---|
| Protein GI | 170679652 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0157211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG TTTCCATGCG CGACATGCTC AAGGCTGGTG TTCACTTCGG TCACCAGACC
CGTTACTGGA ACCCGAAAAT GAAGCCGTTC ATCTTCGGTG CGCGTAACAA AGTTCACATC
ATCAACCTTG AGAAAACTGT ACCGATGTTC AACGAAGCTC TGGCTGAACT GAACAAGATT
GCTTCTCGCA AAGGTAAAAT CCTTTTCGTT GGTACTAAAC GTGCTGCAAG CGAAGCGGTG
AAAGACGCTG CTCTGAGCTG CGACCAGTTC TTCGTGAACC ATCGCTGGCT GGGCGGTATG
CTGACTAACT GGAAAACCGT TCGTCAGTCC ATCAAACGTC TGAAAGACCT GGAAACTCAG
TCTCAGGACG GTACTTTCGA CAAGCTGACC AAGAAAGAAG CGCTGATGCG CACTCGTGAG
CTGGAGAAAC TGGAAAACAG CCTGGGCGGT ATCAAAGACA TGGGCGGTCT GCCGGACGCT
CTGTTTGTAA TCGATGCTGA CCACGAACAC ATTGCTATCA AAGAAGCAAA CAACCTGGGT
ATTCCGGTAT TTGCTATCGT TGATACCAAC TCTGATCCGG ACGGTGTTGA CTTCGTTATC
CCGGGTAACG ACGACGCAAT CCGTGCTGTG ACCCTGTACC TGGGCGCTGT TGCTGCAACC
GTACGTGAAG GCCGTTCTCA GGATCTGGCT TCCCAGGCGG AAGAAAGCTT CGTAGAAGCT
GAGTAA
|
|---|
| Protein sequence | MATVSMRDML KAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NEALAELNKI
ASRKGKILFV GTKRAASEAV KDAALSCDQF FVNHRWLGGM LTNWKTVRQS IKRLKDLETQ
SQDGTFDKLT KKEALMRTRE LEKLENSLGG IKDMGGLPDA LFVIDADHEH IAIKEANNLG
IPVFAIVDTN SDPDGVDFVI PGNDDAIRAV TLYLGAVAAT VREGRSQDLA SQAEESFVEA
E
|
|---|
| |