| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0156 |
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| Symbol | dksA |
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| ID | 6142836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 170554 |
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| End bp | 171009 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615057 |
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| Product | RNA polymerase-binding transcription factor |
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| Protein accession | YP_001742273 |
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| Protein GI | 170679800 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1734] DnaK suppressor protein |
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| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000187582 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGAAG GGCAAAACCG TAAAACATCG TCCCTGAGTA TTCTCGCCAT CGCTGGGGTG
GAGCCATATC AGGAGAAGCC GGGCGAAGAG TATATGAATG AAGCCCAGCT GGCGCACTTC
CGTCGTATTC TGGAAGCATG GCGTAATCAA CTCAGGGATG AAGTCGATCG CACCGTTACA
CATATGCAGG ATGAAGCAGC CAACTTCCCG GACCCGGTAG ACCGTGCAGC CCAGGAAGAA
GAGTTCAGCC TCGAACTGCG TAACCGCGAT CGCGAGCGTA AGCTGATCAA AAAGATCGAG
AAGACGCTGA AAAAAGTGGA AGACGAAGAT TTCGGCTACT GCGAATCCTG CGGTGTTGAA
ATTGGTATTC GCCGTCTGGA AGCGCGCCCG ACAGCCGATC TGTGCATCGA CTGCAAAACG
CTGGCTGAAA TTCGCGAAAA ACAGATGGCT GGCTAA
|
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| Protein sequence | MQEGQNRKTS SLSILAIAGV EPYQEKPGEE YMNEAQLAHF RRILEAWRNQ LRDEVDRTVT
HMQDEAANFP DPVDRAAQEE EFSLELRNRD RERKLIKKIE KTLKKVEDED FGYCESCGVE
IGIRRLEARP TADLCIDCKT LAEIREKQMA G
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