Gene EcSMS35_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0138 
Symbol 
ID6145433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp153755 
End bp154525 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content51% 
IMG OID641615039 
ProductABC transporter, permease protein 
Protein accessionYP_001742255 
Protein GI170679696 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATC TTTACTGGGT GGCGCTAAAA AGCATCTGGG CGAAAGAGAT CCATCGCTTT 
ATGCGTATCT GGGTGCAGAC GCTGGTGCCG CCAGTCATCA CCATGACCCT TTACTTTATT
ATCTTCGGTA ACCTGATTGG TTCGCGTATT GGCGATATGC ATGGCTTCAG CTACATGCAG
TTCATCGTAC CGGGGCTGAT CATGATGTCG GTGATCACCA ACGCCTACGC CAACGTCGCG
TCATCATTTT TTGGTGCCAA GTTCCAGCGT AATATTGAAG AGCTGCTGGT AGCGCCGGTT
CCGACTCATG TCATTATTGC CGGATATGTC GGTGGTGGCG TGGCGCGTGG TTTGTTTGTT
GGTATTTTGG TGACGGCAAT TTCACTGTTT TTTGTGCCGT TTCAGGTGCA TTCGTGGGTA
TTCGTTGCCT TAACCCTGGT GCTCACTGCG GTGCTATTCT CCCTTGCGGG TTTGCTGAAC
GGCGTGTTTG CCAAAACGTT CGATGACATC AGCCTGGTGC CAACCTTTGT GTTAACGCCA
CTCACGTATT TGGGCGGGGT CTTTTACTCC CTGACTTTGC TGCCGCCGTT CTGGCAGGGA
CTGTCGCACC TGAACCCGAT CGTTTATATG ATCAGTGGTT TCCGCTACGG CTTCCTCGGT
ATCAATGATG TGCCGCTGGT CACTACCTTT GGCGTACTGG TGGTCTTTAT TGTGGCGTTT
TATTTGATTT GCTGGTCGCT GATCCAACGT GGGCGTGGTC TACGTAGCTA A
 
Protein sequence
MMHLYWVALK SIWAKEIHRF MRIWVQTLVP PVITMTLYFI IFGNLIGSRI GDMHGFSYMQ 
FIVPGLIMMS VITNAYANVA SSFFGAKFQR NIEELLVAPV PTHVIIAGYV GGGVARGLFV
GILVTAISLF FVPFQVHSWV FVALTLVLTA VLFSLAGLLN GVFAKTFDDI SLVPTFVLTP
LTYLGGVFYS LTLLPPFWQG LSHLNPIVYM ISGFRYGFLG INDVPLVTTF GVLVVFIVAF
YLICWSLIQR GRGLRS