| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0090 |
|---|
| Symbol | murE |
|---|
| ID | 6145782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 99799 |
|---|
| End bp | 101286 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641614991 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_001742207 |
|---|
| Protein GI | 170682313 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.764756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGATC GTAATTTGCG CGACCTTCTT GCTCCGTGGG TGCCAGACGC ACCTTCGCGA
GCACTGCGAG AGATGACACT CGACAGCCGT GTGGCTGCGG CGGGCGATCT CTTTGTAGCT
GTAGTAGGTC ATCAGGCGGA CGGGCGTCGA TATATCCCGC AGGCGATAGC GCAAGGTGTG
GCTGCCATTA TTGCAGAGGC GAAAGATGAG GCGACCGACG GTGAAATCCG TGAAATGCAC
GGCGTACCGG TCATCTATCT CAGCCAGCTC AACGAGCGTT TATCTGCACT GGCGGGCCGC
TTTTACCATG AACCCTCTGA TAATTTACGT CTTGTAGGCG TAACGGGCAC CAACGGCAAA
ACCACGACGA CCCAGCTGCT GGCACAGTGG AGCCAACTGC TTGGCGAAAC CAGCGCGGTA
ATGGGCACCG TTGGTAACGG CCTGCTGGGG AAAGTGATCC CGACAGAAAA TACCACCGGT
TCGGCAGTCG ATGTTCAGCA TGAGCTGGCG GGGCTGGTGG ATCAGGGCGC GACTTTTTGC
GCAATGGAAG TCTCTTCCCA CGGGCTGGTA CAGCATCGCG TGGCGGCGCT GAAATTTGCC
GCATCGGTCT TTACCAACTT AAGCCGCGAT CACCTTGATT ATCATGGTGA TATGGAACAC
TACGAAGCCG CGAAATGGCT GCTTTATTCT GAACATCGTT GCGGTCAGGC GATTATTAAC
GCCGACGATG AAGTGGGCCG CCGCTGGCTG GCAAAACTGC CGGACGCGGT TGCGGTATCA
ATGGAAGATC ATATCAATCT GAACTGTCAC GGACGCTGGT TGAAAGCGAC CGAAGTGAAC
TATCACGACA GCGGTGCGAC GATTCGCTTT AGCTCAAGCT GGGGCGATGG CGAAATTGAA
AGCCATCTGA TGGGCGCTTT TAACGTCAGC AACCTGCTGC TTGCGCTGGC GACACTGCTG
GCACTCGGCT ACCCGCTCGC TGATCTGTTA AAAACCGCCG CGCGTCTGCA ACCGGTTTGC
GGACGTATGG AAGTGTTCAC TGCGCCAGGC AAACCGACGG TGGTGGTGGA TTACGCGCAT
ACGCCGGATG CACTGGAAAA AGCCTTACAG GCGGCGCGCC TGCACTGTGC GGGCAAGCTG
TGGTGCGTCT TTGGCTGTGG TGGCGATCGT GATAAAGGCA AACGTCCACT GATGGGCGCA
ATTGCTGAAG AGTTTGCTGA CGTGGCGGTG GTAACGGACG ATAACCCGCG TACCGAAGAA
CCGCGTGCCA TCATCAACGA TATTCTGGCG GGAATGTTAG ATGCCGGACA TGCCAAAGTG
ATGGAAGGCC GTGCTGAAGC GGTGACTTGC GCCGTTATGC AGGCTAAAGA GAATGATGTG
GTACTGGTCG CGGGCAAAGG TCATGAGGAT TACCAGATTG TTGGCAATCA GCGTCTGGAC
TACTCCGATC GCGTCACGGT GGCGCGTCTG CTGGGGGTGA TTGCATGA
|
|---|
| Protein sequence | MADRNLRDLL APWVPDAPSR ALREMTLDSR VAAAGDLFVA VVGHQADGRR YIPQAIAQGV
AAIIAEAKDE ATDGEIREMH GVPVIYLSQL NERLSALAGR FYHEPSDNLR LVGVTGTNGK
TTTTQLLAQW SQLLGETSAV MGTVGNGLLG KVIPTENTTG SAVDVQHELA GLVDQGATFC
AMEVSSHGLV QHRVAALKFA ASVFTNLSRD HLDYHGDMEH YEAAKWLLYS EHRCGQAIIN
ADDEVGRRWL AKLPDAVAVS MEDHINLNCH GRWLKATEVN YHDSGATIRF SSSWGDGEIE
SHLMGAFNVS NLLLALATLL ALGYPLADLL KTAARLQPVC GRMEVFTAPG KPTVVVDYAH
TPDALEKALQ AARLHCAGKL WCVFGCGGDR DKGKRPLMGA IAEEFADVAV VTDDNPRTEE
PRAIINDILA GMLDAGHAKV MEGRAEAVTC AVMQAKENDV VLVAGKGHED YQIVGNQRLD
YSDRVTVARL LGVIA
|
|---|
| |