Gene EcSMS35_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0083 
SymbolilvI 
ID6145702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp92173 
End bp93987 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content53% 
IMG OID641614984 
Productacetolactate synthase 3 catalytic subunit 
Protein accessionYP_001742200 
Protein GI170683042 
COG category[H] Coenzyme transport and metabolism
[E] Amino acid transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTATGT CTCTGTCTGC TAATTGCTTA AGCAAGATCG GACGGTTAAT GTGTTTTACA 
CATTTTTTCC GTCAAACAGT GAGGCAGGCC ATGGAGATGT TGTCTGGAGC CGAGATGGTC
GTCCGATCGC TTATCGATCA GGGCGTTAAA CAAGTATTCG GTTATCCCGG AGGCGCGGTC
CTTGATATTT ACGATGCATT GCATACCGTG GGTGGTATCG ATCATGTTTT AGTTCGTCAT
GAGCAGGCGG CGGTGCATAT GGCCGATGGT CTGGCGCGCG CGACCGGGGA AGTCGGCGTC
GTGCTGGTAA CGTCGGGTCC AGGGGCGACC AATGCGATTA CTGGCATTGC CACCGCTTAT
ATGGATTCCA TTCCCTTAGT TGTCCTTTCC GGGCAGGTAG CGACCTCGTT GATAGGCTAC
GATGCCTTTC AGGAGTGCGA CATGGTGGGG ATTTCTCGCC CGGTGGTTAA ACACAGTTTT
CTGGTTAAGC AAACGGAAGA CATTCCGCAG GTGCTGAAAA AGGCTTTCTG GCTGGCGGCA
AGTGGTCGCC CTGGGCCCGT GGTCGTTGAT TTACCCAAAG ATATTCTTAA TCCGGCGAAC
AAATTACCCT ACGTCTGGCC GGAGTCGGTC AGTATGCGAT CTTACAATCC CACGACCTCC
GGGCATAAAG GGCAAATTAA GCGCGCTCTG CAAACGCTGG TGGCGGCAAA AAAACCGGTT
GTCTATGTAG GCGGTGGGGC AATCACGGCG GGCTGTCATC AGCAGCTAAA AGAAACGGTG
GAGGCGTTGA ATCTGCCCGT TGTTTCCTCA TTAATGGGGC TGGGGGCGTT TCCGGCAACG
CATCGTCAGG CACTGGGCAT GCTGGGAATG CACGGCACCT ACGAAGCCAA TATGACGATG
CATAACGCGG ATGTGATTTT TGCCGTCGGG GTGCGTTTTG ATGACCGAAC GACGAACAAT
CTGGCGAAGT ACTGCCCAAA TGCCACGGTT CTGCATATCG ACATTGATCC TACTTCCATT
TCTAAAACCG TGACTGCTGA TATCCCGATT GTGGGGGATG CTCGCCAGGT CCTTGAACAA
ATGTTTGAAC TCCTGTCGCA AGAATCCGTC CATCAACCGC TGGATGAGAT CCGCGACTGG
TGGCAACAGA TTGAACAGTG GCGCGCTCGT CAGTGCCTGA AATATGACTC TCACAGTGAA
AAGATTAAAC CGCAGGCGGT GATCGAGACT CTTTGGCGGT TGACGAAGGG AGACGCTTAC
GTGACGTCCG ATGTCGGGCA GCACCAGATG TTTGCTGCGC TTTATTATCC ATTCGACAAA
CCGCGTCGCT GGATCAACTC TGGCGGCCTC GGCACGATGG GGTTTGGTTT GCCTGCGGCA
CTGGGCGTCA AAATGGCGTT GCCAGAAGAA ACCGTGGTTT GCGTCACTGG CGACGGCAGT
ATTCAGATGA ACATCCAGGA ACTGTCTACC GCCTTGCAAT ACGAGTTGCC GGTACTGGTG
GTGAATCTCA ATAACCGCTA TCTGGGGATG GTGAAACAGT GGCAGGACAT GATCTATTCC
GGCCGTCATT CACAATCTTA TATGCAATCG CTACCCGATT TCGTTCGTCT GGCGGAAGCC
TATGGTCACG TCGGGATCCA GATTTCTCAT CCGCAAGAAC TGGAAAGCAA ACTTAGCGAG
GCGCTGGAAC AGGTGCGCAA TAATCGCCTG GTGTTTGTTG ATGTCACCGT CGATGGCAGT
GAGCACGTCT ACCCGATGCA GATTCGCGGG GGCGGAATGG ATGAAATGTG GTTAAGCAAA
ACGGAGAGAA CCTGA
 
Protein sequence
MFMSLSANCL SKIGRLMCFT HFFRQTVRQA MEMLSGAEMV VRSLIDQGVK QVFGYPGGAV 
LDIYDALHTV GGIDHVLVRH EQAAVHMADG LARATGEVGV VLVTSGPGAT NAITGIATAY
MDSIPLVVLS GQVATSLIGY DAFQECDMVG ISRPVVKHSF LVKQTEDIPQ VLKKAFWLAA
SGRPGPVVVD LPKDILNPAN KLPYVWPESV SMRSYNPTTS GHKGQIKRAL QTLVAAKKPV
VYVGGGAITA GCHQQLKETV EALNLPVVSS LMGLGAFPAT HRQALGMLGM HGTYEANMTM
HNADVIFAVG VRFDDRTTNN LAKYCPNATV LHIDIDPTSI SKTVTADIPI VGDARQVLEQ
MFELLSQESV HQPLDEIRDW WQQIEQWRAR QCLKYDSHSE KIKPQAVIET LWRLTKGDAY
VTSDVGQHQM FAALYYPFDK PRRWINSGGL GTMGFGLPAA LGVKMALPEE TVVCVTGDGS
IQMNIQELST ALQYELPVLV VNLNNRYLGM VKQWQDMIYS GRHSQSYMQS LPDFVRLAEA
YGHVGIQISH PQELESKLSE ALEQVRNNRL VFVDVTVDGS EHVYPMQIRG GGMDEMWLSK
TERT