Gene EcSMS35_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0081 
SymbolleuO 
ID6144420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp91001 
End bp91945 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content46% 
IMG OID641614982 
Productleucine transcriptional activator 
Protein accessionYP_001742198 
Protein GI170679841 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAGG TACAAACAGA TCAACCAGAG ACGGCGGAGT TAAGCAAGCC ACAACTACGC 
ATGGTCGATC TCAACTTATT AACCGTTTTC GATGCCGTGA TGCAGGAGCA AAACATCACC
CGTGCCGCTC ATGTTCTGGG GATGTCGCAA CCTGCGGTCA GTAACGCGGT TGCACGCCTG
AAGGTGATGT TTAATGACGA GCTTTTTGTT CGTTATGGCC GTGGCATTCA ACCGACTGCT
CGCGCATTTC AACTTTTTGG TTCAGTTCGT CAGGCATTGC AATTAGTACA AAATGAATTG
CCAGGTTCAG GTTTTGAACC CGCGAGCAGT GAACGTGTAT TTCATCTTTG TGTTTGCAGT
CCGTTAGACA GCATTCTGAC CTCGCAGATT TATAATCACA TTGAGCAAAC TGCGCCAAAT
ATACATGTTA TGTTCAAGTC TTCATTAAAT CAGAACACTG AACATCAACT GCGTTATCAG
GAAACGGAGT TTGTGATTAG TTATGAAGAC TTCCATCGTC CTGAATTTAC CAGTGTGCCA
TTATTTAAAG ATGAAATGGT GCTGGTAGCC AGCAAAAATC ATCCAACAAT TAAAGGCCCG
TTACTGAAAC ATGATGTTTA TAACGAACAA CATGCGGCAG TTTCGCTCGA TCGTTTCGCG
TCATTTAGTC AACCGTGGTA TGACACGGTA GATAAACAAG CCAGTATCGC GTATCAGGGC
ATGGCAATGA TGAGTGTACT GAGCGTGGTG TCGCAAACGC ATCTGGTCGC TATTGCGCCG
CGTTGGTTGG CTGAAGAGTT CGCTGAATCC TTAGAGTTAC AGGTATTACC GCTGCCGTTA
AAACAAAACA GCAGAACCTG TTATCTCTCC TGGCATGAAG CTGCCGGGCG CGATAAAGGC
CATCAGTGGA TGGAAGAGCA ATTAGTCTCA ATTTGCAAAC GCTAA
 
Protein sequence
MPEVQTDQPE TAELSKPQLR MVDLNLLTVF DAVMQEQNIT RAAHVLGMSQ PAVSNAVARL 
KVMFNDELFV RYGRGIQPTA RAFQLFGSVR QALQLVQNEL PGSGFEPASS ERVFHLCVCS
PLDSILTSQI YNHIEQTAPN IHVMFKSSLN QNTEHQLRYQ ETEFVISYED FHRPEFTSVP
LFKDEMVLVA SKNHPTIKGP LLKHDVYNEQ HAAVSLDRFA SFSQPWYDTV DKQASIAYQG
MAMMSVLSVV SQTHLVAIAP RWLAEEFAES LELQVLPLPL KQNSRTCYLS WHEAAGRDKG
HQWMEEQLVS ICKR