| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0076 |
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| Symbol | leuD |
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| ID | 6144971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 85482 |
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| End bp | 86087 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641614977 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | YP_001742193 |
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| Protein GI | 170682967 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.28946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA AATTTATCAA ACATACAGGC CTGGTGGTTC CACTGGATGC CGCCAATGTC
GATACCGATG CAATCATCCC GAAACAGTTT TTGCAGAAAG TGACCCGTAC GGGTTTTGGC
GCGCATCTGT TTAACGACTG GCGTTTTCTG GATGAAAAAG GCCAACAGCC AAACCCGGAC
TTCGTGCTGA ACTTCCCGCA GTATCAGGGC GCTTCCATTT TGCTGGCACG AGAAAACTTC
GGCTGCGGTT CCTCGCGTGA GCACGCGCCG TGGGCATTGA CCGATTACGG TTTTAAAGTG
GTGATTGCAC CGAGTTTTGC TGACATCTTC TACGGCAACA GCTTTAACAA CCAGCTGCTG
CCGGTGAAAT TAAGCGATGC AGAAGTGGAT GAGCTGTTTG CGCTAGTGAA AGCCAATCCG
GGGATCCATT TCGACGTGGA CCTGGAAGCG CAAGAGGTGA AGGCAGGTGA GAAAACCTAT
CGTTTTACCA TCGATGCATT CCGCCGCCAC TGCATGATGA ACGGTCTGGA CAGCATCGGC
CTGACTCTGC AGCACGACGA CGCCATTGCG TCTTATGAAG AGAAGCAACC GGCGTTTATG
CGTTAG
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| Protein sequence | MAEKFIKHTG LVVPLDAANV DTDAIIPKQF LQKVTRTGFG AHLFNDWRFL DEKGQQPNPD
FVLNFPQYQG ASILLARENF GCGSSREHAP WALTDYGFKV VIAPSFADIF YGNSFNNQLL
PVKLSDAEVD ELFALVKANP GIHFDVDLEA QEVKAGEKTY RFTIDAFRRH CMMNGLDSIG
LTLQHDDAIA SYEEKQPAFM R
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