Gene EcSMS35_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0069 
Symbol 
ID6145829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp78241 
End bp79005 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content54% 
IMG OID641614970 
Producthypothetical protein 
Protein accessionYP_001742186 
Protein GI170681148 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.820004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.658906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAT TGCTGGAACA CTTTATTACC CAATCCACCG TGTATTCATT GATGGCGGTG 
GTGTTGGTGG CCTTTCTGGA GTCGCTGGCG CTGGTCGGTT TGATTTTACC CGGTACGGTG
CTAATGGCGG GACTGGGGGC GCTGATTGGC AGTGGCGAGT TAAGTTTCTG GCACGCCTGG
CTGGCAGGGA TCGTCGGTTG CCTGCTGGGC GACTGGATCT CTTTCTGGCT GGGCTGGCGT
TTTAAAAAGC CATTGCATCG CTGGTCATTT CTGAAGAAAA ACAAAGCATT ACTCGATAAA
ACTGAACATG CGTTGCATCA ACACAGCATG TTCACCATTC TGGTCGGTCG CTTTGTTGGC
CCGACGCGTC CGCTGGTGCC AATGGTGGCG GGAATGCTGG ATCTCCCGGT GGCAAAATTT
ATTACGCCGA ATATTATCGG CTGCCTGCTG TGGCCACCGT TTTACTTCCT GCCGGGGATT
CTGGCGGGTG CGGCGATCGA TATTCCTGCC GGGATGCAGA GTGGTGAGTT TAAATGGTTG
CTGCTGGCGA CGGCGGTATT TTTGTGGGTT GGGGGCTGGC TGTGCTGGCG GTTATGGCGC
AGCGGTAAAG CGACTGACCG TTTGAGTCAT TATTTGTCGC GCGGTCGTTT GTTGTGGCTG
ACGCCGTTGA TTTCTGCCAT CGGCGTGGTG GCGCTGGTGG TGTTAATTCG CCACCCGTTG
ATGCCGGTGT ATATCGATAT TTTGCGTAAA GTGGTTGGGG TTTAG
 
Protein sequence
MQALLEHFIT QSTVYSLMAV VLVAFLESLA LVGLILPGTV LMAGLGALIG SGELSFWHAW 
LAGIVGCLLG DWISFWLGWR FKKPLHRWSF LKKNKALLDK TEHALHQHSM FTILVGRFVG
PTRPLVPMVA GMLDLPVAKF ITPNIIGCLL WPPFYFLPGI LAGAAIDIPA GMQSGEFKWL
LLATAVFLWV GGWLCWRLWR SGKATDRLSH YLSRGRLLWL TPLISAIGVV ALVVLIRHPL
MPVYIDILRK VVGV