Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0049 |
Symbol | kefC |
ID | 6143839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 52951 |
End bp | 54813 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641614950 |
Product | glutathione-regulated potassium-efflux system protein KefC |
Protein accession | YP_001742166 |
Protein GI | 170680033 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.709743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAGCC ATACGCTGAT TCAGGCGCTG ATTTATCTCG GTTCGGCGGC GCTGATTGTC CCCATTGCGG TACGTCTTGG TCTGGGATCG GTACTTGGCT ACCTGATCGC GGGTTGTATT ATTGGCCCGT GGGGGCTGCG ACTGGTGACC GATGCCGAAT CTATCCTGCA CTTTGCCGAG ATTGGCGTGG TGCTGATGCT GTTTATTATC GGCCTCGAAC TCGATCCACA AAGGCTGTGG AAGCTGCGTG CGGCGGTGTT CGGTGGTGGC GCATTGCAGA TGGTGATTTG CGGCGGCCTG CTGGGGCTGT TCTGTATGTT GCTTGGGCTG CGCTGGCAGG TCGCGGAACT GATCGGCATG ACGCTGGCGC TCTCCTCTAC GGCGATTGCC ATGCAGGCGA TGAATGAACG TAATCTGATG GTGACGCAGA TGGGCCGCAG TGCCTTTGCG GTGCTGCTGT TCCAGGATAT CGCGGCGATC CCGCTGGTGG CGATGATCCC GCTACTGGCG GCGAGCAGTG CCTCGACGAC GATGGGCGCA TTTGCTCTCT CGGCGTTAAA AGTGGCGGGT GCGCTGGTGC TGGTGGTATT GCTGGGGCGC TATGTCACGC GTCCGGCGCT GCGTTTTGTA GCCCGCTCTG GCTTGCGGGA AGTGTTTAGT GCCGTGGCGT TATTCCTCGT GTTTGGCTTT GGTTTGCTGC TGGAAGAGGT CGGCTTGTCG ATGGCGATGG GCGCGTTTCT GGCGGGCGTA CTGCTGGCAA GCTCGGAATA TCGTCATGCG CTGGAAAGCG ATATCGAACC CTTTAAAGGT TTGCTGCTGG GGCTGTTTTT CATTGGCGTT GGCATGTCGA TAGACTTTGG CACGCTGATT GAAAACCCAT TGCGTATTGT CATTCTGCTG CTCGGTTTCC TCATCATCAA AATCGCCATG CTGTGGCTGA TTGCCCGACC GTTGCAGGTG CCGAATAAAC AGCGTCGCTG GTTTGCGGTG TTGTTAGGGC AGGGTAGTGA GTTTGCTTTT GTGGTGTTTG GCGCGGCGCA AATGGCGAAT GTGCTGGAGC CGGAGTGGGC GAAATCGCTG ACCCTGGCGG TGGCGCTGTC GATGGCGGCA ACGCCGATTC TGCTGGTGAT CCTCAATCGC CTTGAGCAAT CTTCTACTGA AGAGGCGCGT GAAGCCGATG AGATCGACGA AGAACAGCCG CGGGTAATCA TCGCCGGATT CGGTCGTTTT GGGCAGATAA CCGGACGTTT ACTGCTCTCC AGCGGGGTGA AAATGGTGGT GCTCGATCAC GATCCGGACC ATATCGAAAC CTTGCGTAAA TTTGGTATGA AAGTGTTTTA TGGCGATGCC ACGCGGATGG ATTTACTGGA ATCTGCCGGA GCGGCGAAAG CGGAAGTGCT GATTAACGCC ATCGACGATC CGCAAACCAA CCTGCAACTG ACAGAGATGG TGAAAGAACA TTTCCCGCAT TTGCAGATTA TTGCCCGCGC CCGCGATGTC GACCACTACA TTCGTTTGCG TCAGGCAGGC GTTGAAAAGC CGGAGCGTGA AACCTTCGAA GGTGCGCTCA AAACCGGGCG TCTGGCACTG GAAAGTTTAG GTCTGGGGCC GTATGAAGCG CGAGAACGTG CCGATGTGTT CCGCCGCTTT AATATTCAGA TGGTGGAAGA GATGGCAATG GTTGAGAACG ACACCAAAGC CCGTGCGGCG GTCTATAAAC GCACCAGCGC GATGTTAAGT GAGATCATTA CCGAAGACCG TGAACATCTG TCATTAATTC AACGACATGG CTGGCAGGGA ACCGAAGAAG GGAAACATAC TGGCAATATG GCGGATGAAC CGGAAACGAA ACCCTCATCC TAA
|
Protein sequence | MDSHTLIQAL IYLGSAALIV PIAVRLGLGS VLGYLIAGCI IGPWGLRLVT DAESILHFAE IGVVLMLFII GLELDPQRLW KLRAAVFGGG ALQMVICGGL LGLFCMLLGL RWQVAELIGM TLALSSTAIA MQAMNERNLM VTQMGRSAFA VLLFQDIAAI PLVAMIPLLA ASSASTTMGA FALSALKVAG ALVLVVLLGR YVTRPALRFV ARSGLREVFS AVALFLVFGF GLLLEEVGLS MAMGAFLAGV LLASSEYRHA LESDIEPFKG LLLGLFFIGV GMSIDFGTLI ENPLRIVILL LGFLIIKIAM LWLIARPLQV PNKQRRWFAV LLGQGSEFAF VVFGAAQMAN VLEPEWAKSL TLAVALSMAA TPILLVILNR LEQSSTEEAR EADEIDEEQP RVIIAGFGRF GQITGRLLLS SGVKMVVLDH DPDHIETLRK FGMKVFYGDA TRMDLLESAG AAKAEVLINA IDDPQTNLQL TEMVKEHFPH LQIIARARDV DHYIRLRQAG VEKPERETFE GALKTGRLAL ESLGLGPYEA RERADVFRRF NIQMVEEMAM VENDTKARAA VYKRTSAMLS EIITEDREHL SLIQRHGWQG TEEGKHTGNM ADEPETKPSS
|
| |