| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0029 |
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| Symbol | dapB |
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| ID | 6145167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 33521 |
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| End bp | 34342 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641614930 |
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| Product | dihydrodipicolinate reductase |
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| Protein accession | YP_001742146 |
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| Protein GI | 170682871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0289] Dihydrodipicolinate reductase |
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| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.732281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGATG CAAACATCCG CGTTGCCATC GCGGGAGCCG GGGGGCGTAT GGGCCGCCAG
TTGATTCAGG CGGCGCTGGC ATTAGAAGGC GTGCAGCTGG GCGCGGCGCT GGAGCGCGAA
GGATCTTCTT TACTGGGCAG CGACGCCGGT GAGCTGGCGG GTGCAGGAAA AACAGGCGTT
ACTGTGCAAA GCAGCCTTGA TGCGATAAAA GATGATTTTG ATGTGTTTAT CGATTTTACC
CGTCCGGAAG GTACGCTGAA CCATCTCGCT TTTTGTCGCC AGCATGGCAA AGGGATGGTG
ATCGGCACTA CGGGGTTTGA CGAAGCCGGT AAACAGGCGA TTCGTGACGC CGCCGCCGAT
ATTGCGATTG TCTTTGCCGC CAATTTTAGC GTTGGCGTTA ACGTCATGCT TAAACTGCTG
GAGAAAGCAG CCAAAGTGAT GGGGGACTAC ACCGATATCG AAATTATTGA AGCACATCAT
AGACATAAAG TTGATGCGCC GTCAGGCACC GCACTGGCAA TGGGAGAGGC GATCGCCCAC
GCTCTTGATA AAGATCTGAA AGATTGCGCG GTCTACAGTC GTGAAGGCCA TACCGGTGAA
CGTGTGCCTG GCACCATTGG TTTTGCCACC GTGCGTGCAG GTGACATCGT TGGCGAACAT
ACCGCGATGT TTGCCGATAT TGGCGAGCGT CTGGAGATCA CCCATAAGGC ATCCAGCCGC
ATGACATTTG CTAACGGTGC GGTAAGATCG GCTTTGTGGT TGAGTGGTAA GGAAAGTGGT
CTTTTTGATA TGCGAGATGT GCTTGATCTC AATAATCTGT AA
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| Protein sequence | MHDANIRVAI AGAGGRMGRQ LIQAALALEG VQLGAALERE GSSLLGSDAG ELAGAGKTGV
TVQSSLDAIK DDFDVFIDFT RPEGTLNHLA FCRQHGKGMV IGTTGFDEAG KQAIRDAAAD
IAIVFAANFS VGVNVMLKLL EKAAKVMGDY TDIEIIEAHH RHKVDAPSGT ALAMGEAIAH
ALDKDLKDCA VYSREGHTGE RVPGTIGFAT VRAGDIVGEH TAMFADIGER LEITHKASSR
MTFANGAVRS ALWLSGKESG LFDMRDVLDL NNL
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