| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0028 |
|---|
| Symbol | rihC |
|---|
| ID | 6143577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 32440 |
|---|
| End bp | 33354 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641614929 |
|---|
| Product | ribonucleoside hydrolase RihC |
|---|
| Protein accession | YP_001742145 |
|---|
| Protein GI | 170680986 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.291651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTAC CTATCTTCCT CGATACTGAC CCCGGCATTG ACGATGCCGT CGCCATTGCC
GCCGCGATTT TTGCCCCGGA ACTTGACCTG CAACTGATGA CCACCGTCGC GGGTAATGTC
TCGGTAGAGA AAACTACCCG CAACGCCCTG CAACTGCTGC ATTTCTGGAA TGCGGAGATT
CCGCTCGCCC AGGGAGCCGC TGTGCCGCTG GTACGCGCAC CGCGTAATGC AGCATCTGTG
CACGGTGAAT CGGGAATGGC TGGCTACGAC TTTGTCGAGC ACAACAGAAG CCCACTGGAC
AAACCCGCAT TTCTGGCGAT TCGTGATGCC CTGATGCGTG CACCAGAGCC TGTTACCCTG
GTGGCCATCG GCCCGTTAAC CAATATTGCG CTGTTACTTT CACAATGCCC GGAATGTAAA
CAGTATATTC GTCGTCTGGT GATCATGGGC GGTTCTGCTG GTCGCGGCAA CTGTACACCA
AACGCCGAGT TTAATATCGC TGCCGATCCA GAAGCGGCAG CCTGTGTCTT CCGTAGCGGC
ATCGAAATCG TTATGTGCGG TCTGGATGTC ACCAATCAGG CAATATTAAC TCCTGACTAT
CTCGCTACTT TGCCGGAGTT GAATCGTACC GGGAAAATGT TGCACGCCCT GTTTAGCCAC
TACCGTAGCG GCAGTATGCA AAGCGGTCTG CGTATGCACG ATCTCTGCGC TATCGCCTGG
CTGGTGCGCC CAGACTTGTT CACTCTCAAA CCGTGTTTTG TGGCGGTGGA AACTCAGGGT
GAATTTACCT CAGGTACTAC GGTTGTTGAT ATTGATGGTT GCCTGAGTAA ACCTGCAAAC
GTGCAGGTGG CGCTGGATCT GGATGTGAAA GGTTTCCAGC AGTGGGTGGC TGAGGTGCTG
GCTCTGGCGT CGTAA
|
|---|
| Protein sequence | MRLPIFLDTD PGIDDAVAIA AAIFAPELDL QLMTTVAGNV SVEKTTRNAL QLLHFWNAEI
PLAQGAAVPL VRAPRNAASV HGESGMAGYD FVEHNRSPLD KPAFLAIRDA LMRAPEPVTL
VAIGPLTNIA LLLSQCPECK QYIRRLVIMG GSAGRGNCTP NAEFNIAADP EAAACVFRSG
IEIVMCGLDV TNQAILTPDY LATLPELNRT GKMLHALFSH YRSGSMQSGL RMHDLCAIAW
LVRPDLFTLK PCFVAVETQG EFTSGTTVVD IDGCLSKPAN VQVALDLDVK GFQQWVAEVL
ALAS
|
|---|
| |