| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0084 |
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| Symbol | sitA_1 |
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| ID | 6106487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 63921 |
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| End bp | 64835 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641614831 |
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| Product | iron/manganese transport system periplasmic binding protein SitA |
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| Protein accession | YP_001739972 |
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| Protein GI | 170650778 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.224306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000000789185 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCTCAA TAAAAAAAGT AACCATGCTC TTGGGGTGCC TAGTCCTCAC CTGCTCGATA
GCATTTCAGG CGAGTGCAGC TGAAAAATTC AAGGTCATTA CAACTTTTAC CATCATCGCA
GATATGGCCA AAAACGTGGC TGGAGATGCT GCAGAAGTCT CATCCATAAC CAAGCCTGGT
GCAGAAATTC ATGAGTATCA GCCTACCCCT GGCGATATTA AACGTGCGCA GGGGGCACAA
CTGATTCTCG CCAATGGTAT GAATCTGGAA TTGTGGTTCC AACGCTTTTA CCAGCATCTC
AATGGGGTTC CAGAAGTAAT TGTCTCTTCG GGTGTGACGC CAGTAGGGAT CACCGAAGGG
CCCTATGAGG GCAAACCTAA CCCCCATGCC TGGATGTCGC CAGATAATGC TCTGATTTAC
GTCGATAATA TTCGTGATGC GTTTATAAAA TACGATCCGG CAAATGCACA AACCTACCAA
CGTAATGCCG ATACTTATAA AGCCAAGATT ACCCAAACCC TTGCCCCCCT GCGTAAGCAG
ATTGCGGAAC TCCCTGAGAA TCAGCGATGG ATGGTCACCA GTGAAGGGGC TTTTTCTTAT
CTCGCACGCG ATTTGGGGCT AAAAGAGCTT TATCTGTGGC CGATTAATGC CGATCAACAA
GGAACACCGC AGCAGGTACG TAAGGTTGTT GATATAGTTA AGAAAAATCA TATCCCGGCA
GTCTTTAGCG AGAGTACGAT TTCCGATAAA CCAGCGCGTC AGGTTGCGCG TGAAACCGGC
GCGCACTACG GTGGTGTGCT CTATGTCGAT TCCCTGAGCA CAGAAAACGG CCCGGTACCT
ACGTATATCG ACCTTCTGAA GGTTACTACC AGTACGCTGG TACAGGGAAT TAAAGCCGGA
AAAAGGGAGA AATAA
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| Protein sequence | MLSIKKVTML LGCLVLTCSI AFQASAAEKF KVITTFTIIA DMAKNVAGDA AEVSSITKPG
AEIHEYQPTP GDIKRAQGAQ LILANGMNLE LWFQRFYQHL NGVPEVIVSS GVTPVGITEG
PYEGKPNPHA WMSPDNALIY VDNIRDAFIK YDPANAQTYQ RNADTYKAKI TQTLAPLRKQ
IAELPENQRW MVTSEGAFSY LARDLGLKEL YLWPINADQQ GTPQQVRKVV DIVKKNHIPA
VFSESTISDK PARQVARETG AHYGGVLYVD SLSTENGPVP TYIDLLKVTT STLVQGIKAG
KREK
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