Gene EcSMS35_A0056 details

Gene Information

• Locus tag: EcSMS35_A0056
• Symbol: ssb1
• ID: 6106536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli SMS-3-5
• Kingdom: Bacteria
• Replicon accession: NC_010488
• Strand: -
• Start bp: 44204
• End bp: 44731
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641614803
• Product: single-stranded DNA-binding protein
• Protein accession: YP_001739944
• Protein GI: 170650901
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 0.564154
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAGTTC GTGGCATTAA CAAGGTCATT CTTGTCGGTC GTCTGGGAAA AGATCCGGAA 
GTCCGTTACA TCCCAAACGG GGGCGCAGTG GCAAACCTGC AGGTGGCCAC GTCAGAAAGC 
TGGCGCGACA AACAGACGGG GGAGATACGG GAGCAGACAG AATGGCATCG CGTGGTGCTG 
TTCGGCAAGC TCGCGGAAGT GGCTGGTGAG TATCTGCGCA AGGGCGCGCA GGTCTACATC 
GAAGGTCAGC TTCGCACCCG TAGCTGGGAG GATAACGGTA TCACCCGTTA CGTCACCGAA 
ATTCTTGTTA AGACCACGGG CACCATGCAG ATGCTGGGAC GTGCCGCAGG TACTCAGACT 
CAGCCGGAAG AGGCGCAACA GTTCAGCGGT CAGCCTCAGC CGGAATCACA GCCGGAACCG 
AAAAAAGGAG GCGCGAAAAC GAAAGGCCGT GGACGTAAGG CCGCGCAGCC GGAGCCTCAG 
CAGCCGTCTG AACCCGCGTA TGACTTCGAT GACGACATTC CGTTCTAA 

 

Protein sequence

MAVRGINKVI LVGRLGKDPE VRYIPNGGAV ANLQVATSES WRDKQTGEIR EQTEWHRVVL 
FGKLAEVAGE YLRKGAQVYI EGQLRTRSWE DNGITRYVTE ILVKTTGTMQ MLGRAAGTQT 
QPEEAQQFSG QPQPESQPEP KKGGAKTKGR GRKAAQPEPQ QPSEPAYDFD DDIPF