| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1796 |
|---|
| Symbol | |
|---|
| ID | 6093247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1813387 |
|---|
| End bp | 1814247 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642488993 |
|---|
| Product | 2,5-didehydrogluconate reductase |
|---|
| Protein accession | YP_001739810 |
|---|
| Protein GI | 170289572 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000313979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTTC CAAAAGTTAC TTTGAACAAC GGTGTAGAAA TGCCTATTCT GGGATACGGA
GTTTTCCAGA TACCACCAGA AAAGACGGAA GAATGTGTCT ATGAGGCTAT AAAGGTGGGA
TACAGACTCA TCGACACAGC AGCATCGTAC ATGAACGAAG AGGGAGTGGG AAGAGCGATA
AAACGCGCGA TTGACGAAGG AATTGTCAGA AGAGAGGAGC TCTTCGTCAC GACCAAACTG
TGGGTGTCGG ATGTTGGTTA CGAATCCACA AAGAAGGCTT TTGAAAAGTC TTTGAAGAAA
CTGCAACTCG AATACATAGA TCTCTATCTA ATTCATCAAC CTTTTGGAGA TGTACACTGT
GCCTGGAAAG CTATGGAAGA AATGTACAAA GATGGATTGG TAAGAGCCAT AGGTGTGAGC
AACTTCTACC CTGATCGGTT GATGGATCTA ATGGTTCATC ACGAAATTGT TCCCGCGGTG
AACCAGATCG AGATACATCC GTTTTATCAG AGACAAGAGG AGATCGAATT CATGAGAAAT
TACAACATCC AACCTGAAGC TTGGGGTCCT TTCGCTGAGG GAAGAAAAAA CATTTTCCAG
AACGGAGTGC TCAGATCGAT CGCGGAAAAG TACGGCAAAA CGGTTGCACA GGTCATTCTG
AGATGGCTCA CTCAGAAAGG AATCGTTGCC ATTCCCAAAA CTGTGAGAAG AGAGAGGATG
ATAGAAAACA TCAGCATCTT CGATTTTGAA CTCACACAGG AAGACATGGA AAAGATTGCA
ACGCTCGATG AAGGGCAGAG TGCGTTCTTC TCCCACAGGG ATCCCGAGGT TGTCAAGTGG
ATTTGTTCAC TGAAAAGATG A
|
|---|
| Protein sequence | MQVPKVTLNN GVEMPILGYG VFQIPPEKTE ECVYEAIKVG YRLIDTAASY MNEEGVGRAI
KRAIDEGIVR REELFVTTKL WVSDVGYEST KKAFEKSLKK LQLEYIDLYL IHQPFGDVHC
AWKAMEEMYK DGLVRAIGVS NFYPDRLMDL MVHHEIVPAV NQIEIHPFYQ RQEEIEFMRN
YNIQPEAWGP FAEGRKNIFQ NGVLRSIAEK YGKTVAQVIL RWLTQKGIVA IPKTVRRERM
IENISIFDFE LTQEDMEKIA TLDEGQSAFF SHRDPEVVKW ICSLKR
|
|---|
| |